Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_2908 |
Symbol | |
ID | 4897899 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009049 |
Strand | + |
Start bp | 3063875 |
End bp | 3064867 |
Gene Length | 993 bp |
Protein Length | 330 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640113511 |
Product | inner-membrane translocator |
Protein accession | YP_001044782 |
Protein GI | 126463668 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.701792 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGTGCCG TCACCGCCCC CCGTCCCCGC TTCCATCTGC ATGTGCTGGG GCCGCTGCTC GCGCTCTTCG TGCTGATCGC GCTCGGCGCC TGGCTGAACC CGAACTTCCT CAGCTACGGC AACGTGACGA ACGTGCTGGC GCGCTCGGCC TTCATCGGCA TCATCGCCGT GGGCATGACC TTCGTCATCA CCTCGGGCGG CATCGACCTC TCGGTGGGAT CGATGGCGGC CTTCATCGCG GGGCTGATGA TCCTGTCGAT GAACGCGCTT CTGCCCCACA TGGGCGAAGG GGTCTCGGTC ATCTTCGTGG GGGTGCTGGT CGCCGCCGGC GCGGGCCTCC TTGCCGGCTG GCTCAACGGC TTTCTCATCG CCAAGGTGGG GATCGAGCCC TTCATCGTGA CGCTGGGCAC CATGGGCATC TACCGCTCGC TCGTCACCTG GCTGGCCGAC GGCGGCACGC TCTCGCTCGA TTTCGGCCTC CGCGGCCTCT ACCGGCCGGT CTATTACGGC GGGATCCTGG GCGTCGCCTG GCCGATCATC GTCTTTGCGA TCGTGGCCAT TCTGGGCGAG ATCGTGATGC GCCAGACAGC CTTCGGCCGC CATGTCGCGG CCATCGGGGC GAACGAACAG GTGGCGCGCT ACTCGGCCGT CAAGGTTCCG CGCGTGCGGA TCGCGACCTA CGCGCTTCTG GGGCTGCTCG TGGGGATCGC CACCATCATG TATGTGCCGC GGCTGGGCTC GGCCTCGGGC TCGACCGGCG TCCTGTGGGA GCTCGAGGCC ATCGCCGCCG TCATCATCGG CGGCACGGTG CTCAAGGGCG GCTACGGCCG CGTCTGGGGC ACGGTGGTGG GCGTCCTGAT CCTCAGCCTG ATCGACAATA TCCTGAACCT CGCCTCGATC GTCAGCCCCT ATCTCAACGG CACGATCCAG GGCGTCATCG TCATCCTCGC TGTCGTCTTG CAGCGGGAGA AGAAGGCCGC GGACGCGCGG TAG
|
Protein sequence | MSAVTAPRPR FHLHVLGPLL ALFVLIALGA WLNPNFLSYG NVTNVLARSA FIGIIAVGMT FVITSGGIDL SVGSMAAFIA GLMILSMNAL LPHMGEGVSV IFVGVLVAAG AGLLAGWLNG FLIAKVGIEP FIVTLGTMGI YRSLVTWLAD GGTLSLDFGL RGLYRPVYYG GILGVAWPII VFAIVAILGE IVMRQTAFGR HVAAIGANEQ VARYSAVKVP RVRIATYALL GLLVGIATIM YVPRLGSASG STGVLWELEA IAAVIIGGTV LKGGYGRVWG TVVGVLILSL IDNILNLASI VSPYLNGTIQ GVIVILAVVL QREKKAADAR
|
| |