Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_2885 |
Symbol | |
ID | 4897735 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009049 |
Strand | + |
Start bp | 3043106 |
End bp | 3044263 |
Gene Length | 1158 bp |
Protein Length | 385 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640113488 |
Product | coproporphyrinogen III oxidase |
Protein accession | YP_001044759 |
Protein GI | 126463645 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
TIGRFAM ID | [TIGR00539] putative oxygen-independent coproporphyrinogen III oxidase |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACGACT GGCGGAACGG CGGCTTCGGG CTTTACCTGC ACTGGCCGTT CTGTCAGTCG AAATGCCCCT ACTGCGACTT CAATTCCCAC GTCGCGGCCA CCATCGATCA GGGGCGCTGG CAGCGCGCCT ATCTCTCCGA AATCCGCCGC CTGGGCACCG AGACCGAAGG CCGGGTGCTG AACTCGGTCT TCTTCGGCGG CGGCACGCCC TCGCTGATGG AACCCGACCT CGTGGCGGCC ATCCTCGAGA CGGTGCGCAC CACCTGGCCG CTCGCCAACG ATCTGGAGGT GACACTCGAG GCCAATCCGG GCTCGGTCGA GGCCGGGCGT TTCCGGGGCT ATCGCGCGGC GGGCGTGAAC CGCATCTCGA TGGGCATTCA GGCGCTGAAC GACGCGGACC TGAGGAAGCT CGGGCGGCTC CATACGGTGG CCGAGGCGCG GGCCGCGTTC GACGTGGCCC ACACGACCTT CGACCGGGTG AGCTTCGACC TGATCTATGC CCGGCAGGAC CAGCCGCTGG AGCATTGGCG CAGCGAACTG ACCGAGGCGC TGACGATGGC CGCCGATCAC CTCTCGATGT ATCAACTTAC AGTTGAAGAC GGCACAGCTT TCGGCGACCG TTTCAAGCGG GGCAAGCTGC GGGGGCTGCC GGAAGAGGAG CTGTCGGCGG ACATGTATGC GCTGACGCAG GATCTGTGCG AGGCGGCGGG CCTGCCCGCC TATGAAGTCT CCAATCATGC GCGGCCGGGC GCCGAATCGC GGCACAATCT GATCTACTGG CGCGGCGGCG ACTATGCGGG CGTGGGACCC GGCGCCCACG GGCGCCTCAC CTTTCCGACC GGACGCTGGG CGACCGAAGC CCCCAGGGCA CCCGGAGCCT GGCTCGAGCG CGTGGAACGC GACGGCACTG GCGAAGGCCC GCGGGTCCGA CTGGACGCCG AGGATCATGC GCTCGAATAT CTGATGATGT CCCTCCGCCT GCGTGAGGGG CTCGACCGCG GGCGCCATGC GGCGCTCGCC GGGCGGCCAC TGGACGAGCG GCGGGTCGCG GACCTGCGGG AGATGGGCAT GATCGACACG GACGACGAGC GGATCTTCGC GACGACCGAG GGTCGGATGG TCCTCAATTC CGTCATCACC GCTCTGGCGG GGGCGTAG
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Protein sequence | MDDWRNGGFG LYLHWPFCQS KCPYCDFNSH VAATIDQGRW QRAYLSEIRR LGTETEGRVL NSVFFGGGTP SLMEPDLVAA ILETVRTTWP LANDLEVTLE ANPGSVEAGR FRGYRAAGVN RISMGIQALN DADLRKLGRL HTVAEARAAF DVAHTTFDRV SFDLIYARQD QPLEHWRSEL TEALTMAADH LSMYQLTVED GTAFGDRFKR GKLRGLPEEE LSADMYALTQ DLCEAAGLPA YEVSNHARPG AESRHNLIYW RGGDYAGVGP GAHGRLTFPT GRWATEAPRA PGAWLERVER DGTGEGPRVR LDAEDHALEY LMMSLRLREG LDRGRHAALA GRPLDERRVA DLREMGMIDT DDERIFATTE GRMVLNSVIT ALAGA
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