Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_2882 |
Symbol | rph |
ID | 4897732 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009049 |
Strand | + |
Start bp | 3041411 |
End bp | 3042124 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640113485 |
Product | ribonuclease PH |
Protein accession | YP_001044756 |
Protein GI | 126463642 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0689] RNase PH |
TIGRFAM ID | [TIGR01966] ribonuclease PH |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTCCTT CCGGCAGAAA ACTCGACCAG ATGCGGTCGG TTTCCATTGA GCCCAATGTG ATGAAACATG CCGAGGGCTC GTGCCTTATC CGCATGGGCG AAACGCATGT GCTCTGCTCG GCCTCGATCG AGGACAAGCC CCCGCCGTTC CTGAAGAATA CCGGCCTCGG CTGGGTGACG GCCGAATATG GGATGCTGCC GCGCGCCACC ACCTCGCGCA ACCGCCGCGA GGCGGCCGCG GGCAAGCAGA GCGGCCGCAC GCAGGAGATC CAGCGCCTGA TCGGCCGGGC GCTCCGCGCG GGCGTCGACC GCTCCGCCCT CGGCGAGCGC CAGATCGTGA TCGACTGTGA CGTGCTGCAG GCCGACGGCG GCACCCGCTG TGCCTCGATC ACCGGCGGCT GGGTCGCGCT GCGGCTCGCG GTGAACAAGC TGCTGAAGGC GGGGATCATC GTCTCGGATC CGATCGTCGA TCATGTGGCG GCGGTGTCCT GCGGGATCTA CGCGGGCCAG CCGGTGCTGG ATCTCGACTA TGCCGAGGAT TCGACCGCCG GCACCGACGG CAACTTTGTC CTCACCGGCC GCAGCCGGAT GATCGAGGTG CAGATGTCGG CCGAAGGTGC GAGCTTCTCG CGCGACGAGA TGGGGCAGCT TCTCGACCTC GCCGAGGCGG GCATCGCCGA ACTGGTGGCC GCGCAGAAGG CTGCCCTCGG ATGA
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Protein sequence | MRPSGRKLDQ MRSVSIEPNV MKHAEGSCLI RMGETHVLCS ASIEDKPPPF LKNTGLGWVT AEYGMLPRAT TSRNRREAAA GKQSGRTQEI QRLIGRALRA GVDRSALGER QIVIDCDVLQ ADGGTRCASI TGGWVALRLA VNKLLKAGII VSDPIVDHVA AVSCGIYAGQ PVLDLDYAED STAGTDGNFV LTGRSRMIEV QMSAEGASFS RDEMGQLLDL AEAGIAELVA AQKAALG
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