Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_2842 |
Symbol | |
ID | 4897432 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009049 |
Strand | - |
Start bp | 2995763 |
End bp | 2996788 |
Gene Length | 1026 bp |
Protein Length | 341 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640113445 |
Product | D-xylose ABC transporter, periplasmic substrate-binding protein |
Protein accession | YP_001044716 |
Protein GI | 126463602 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG4213] ABC-type xylose transport system, periplasmic component |
TIGRFAM ID | [TIGR02634] D-xylose ABC transporter, substrate-binding protein |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATAAGG CCCTTTTGGC CGCCGTGGTC GCCACGGCCG GCTTTTCCTC TGCCGCGCTC GCCCAGGATC TGACGGTCGG CGTCAGCTGG TCGAACTTTC AGGAAGAACG CTGGAAGACC GACGAGGCCG CGATCAAGGA GGCCCTCGAA GCGGCGGGCG CCACCTATGT CTCGGCCGAC GCGCAATCCT CCTCGGCCAA GCAGCTGTCC GACGTCGAGG CGCTGATCTC GCAGGGCGTC GATGCGCTCA TCATTCTGGC GCAGGATGCC GACGCCATCG GCCCGGCCGT GCAGGCGGCC GCCGACGAGG GCATTCCGGT CGTGGCCTAT GACCGGCTGA TCGAGGACAA CCGCGCCTTC TACCTGACCT TCGACAACGT CGAGGTGGGC CGCATGCAGG CCCGCGCCGT GTTCGAGCAG GCGCCGAAGG GCAATTATGT CATGATCAAG GGCAATGCCG CCGACCCGAA CGCCGACTTC CTGCGCGGCG GCCAGCAGGA GGTGCTGCAG AAGGCCATCG ACGCGGGCGA CATCACCATC GTGGGCGAGG CCTATACCGA CAGCTGGCTG CCCGCCAACG CCCAGCGGAA CATGGAGCAG ATCCTGACCG CCAACGACAA CAAGGTCGAT GCGGTCGTGG CCTCGAACGA CGGCACCGCG GGCGGCGCCA TCGCCGCGCT GACGGCGCAG GGGATGCAGG GCATTCCGGT CTCGGGTCAG GACGGCGACC ATGCGGCGCT GAACCGGATC GCCAAGGGCA CGCAGACCGT CTCGGTCTGG AAGGACTCGC GCGAGCTGGG CAAGGCCGCC GCCGAGATCG CCGTGGCGAT GGCCAAGGGC ACCGAGATGG AAGGCGTCGA GGGCGCCCAG AAATGGACCT CGCCCAAGGG CACCGAGATG AACGCCGTGT TCCTCGAGCC CATCGCCATC ACCAAGGACA ACCTCTCGGT CGTCGTGGAT GCGGGCTGGA TCGGGAAGGA CGCGCTCTGC CAGGGCGTCT CGAACGGCCC GGCCCCCTGC AACTGA
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Protein sequence | MHKALLAAVV ATAGFSSAAL AQDLTVGVSW SNFQEERWKT DEAAIKEALE AAGATYVSAD AQSSSAKQLS DVEALISQGV DALIILAQDA DAIGPAVQAA ADEGIPVVAY DRLIEDNRAF YLTFDNVEVG RMQARAVFEQ APKGNYVMIK GNAADPNADF LRGGQQEVLQ KAIDAGDITI VGEAYTDSWL PANAQRNMEQ ILTANDNKVD AVVASNDGTA GGAIAALTAQ GMQGIPVSGQ DGDHAALNRI AKGTQTVSVW KDSRELGKAA AEIAVAMAKG TEMEGVEGAQ KWTSPKGTEM NAVFLEPIAI TKDNLSVVVD AGWIGKDALC QGVSNGPAPC N
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