Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_2840 |
Symbol | |
ID | 4897419 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009049 |
Strand | - |
Start bp | 2993598 |
End bp | 2994380 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640113443 |
Product | ABC transporter related |
Protein accession | YP_001044714 |
Protein GI | 126463600 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.3845 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCTCA ACCCGAACCG CGCTGCCGGC GCCACGCCGC TGGTGGAGAT GCGCGACGTC TCGATCAGCT TCGGCGGCAT CCGCGCGGTG GATCACGTCT CGCTCGACCT CCATGCGGGC GAGGTGGTGG GGCTCCTTGG CCACAACGGC GCGGGCAAAT CCACCCTCAT CAAATGCCTC TCGGGCGCCT ACCGGATGGA CTCGGGCGAG ATCCGCATCA ACGGCGAGAA GGCCGAGATC CACAACCCGC GCGACGCCCG CCGCTACAAT ATCGAGACGA TCTACCAGAC GCTCGCGCTG GCGGACAATC TCGATGCCGC CTCGAACCTG TTCCTCGGGC GCGAGCTTGT CACGCCGCTG GGCTTCGTCG ACGATGCGCG GATGGAGGCC GAGACGCGCC GCATCATGGG GCGGCTCAAC CCGAACTTCC GCAAGTTCAA GGTGCCGGTC GCGGCCCTGT CCGGCGGCCA GCGCCAGTCG GTCGCCATCG CGCGGGCGGT CTATTTCAAT GCCAAAATCC TCATCATGGA CGAGCCCACC GCCGCGCTGG GCCCGCAGGA GACGCGGATG GTGGGCGAGC TGATCCAGGA ATTGAAGCGG CAGGGCCTCG GCATCTTCCT CATCAGCCAC GACATCCATG ACGTGATGGA TCTCTGCGAC CGCATTTCGG TGATGAAGAA CGGGGTGCTG GTCGGCTCCG AGCAGGTGGG CGATGTCACC GAGGACGAGA TCCTCGGCAT GATCATCCTC GGCAAGAAGC CCGAACGGGC GGGAGCTGTC TGA
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Protein sequence | MTLNPNRAAG ATPLVEMRDV SISFGGIRAV DHVSLDLHAG EVVGLLGHNG AGKSTLIKCL SGAYRMDSGE IRINGEKAEI HNPRDARRYN IETIYQTLAL ADNLDAASNL FLGRELVTPL GFVDDARMEA ETRRIMGRLN PNFRKFKVPV AALSGGQRQS VAIARAVYFN AKILIMDEPT AALGPQETRM VGELIQELKR QGLGIFLISH DIHDVMDLCD RISVMKNGVL VGSEQVGDVT EDEILGMIIL GKKPERAGAV
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