Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_2838 |
Symbol | |
ID | 4897392 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009049 |
Strand | - |
Start bp | 2990864 |
End bp | 2992165 |
Gene Length | 1302 bp |
Protein Length | 433 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640113441 |
Product | xylose isomerase |
Protein accession | YP_001044712 |
Protein GI | 126463598 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2115] Xylose isomerase |
TIGRFAM ID | [TIGR02630] xylose isomerase |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0695629 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGACT TCTTCGCGGG TATCCCGCAG ATCCGCTACG AGGGCGAAGG CTCCTCCAAC GAATTCGCCT TCCGCCACTA CAATCCCGAC GAGGTGATCC TCGGCAAGCG GATGGAAGAG CATCTGCGAT TCGCGGTCGC CTGGTGGCAC AGCTTCGCCT GGCCGGGCGG CGATCCGTTC GGCGGCCAGA CCTTCAACCG GCCGTGGTTC GGCGATACGC TGGACCTCGC GAAGCTCAAG GCCGACGTGG CCTTCGAGAT GTTCGACATC CTCGGCGCGC CCTTCTTCTG CTTCCACGAT GCCGACATCC GCCCCGAAGG CGCGACCTTC GCCGAAAGCA AGCGCAACCT CGAGGAGATC GTCGACCACA TCGGCACCAG GATGGAAGGG TCGAAGACGA AGCTCCTCTG GGGCACGGCG AACCTCTTCT CGCACCGCCG CTTCATGTCG GGCGCGGCCA CCAACCCCGA TCCCGACGTC TTCGCCTGGT CGGCGGCCAC GGTGAAGGGC TGCATGGACG CCACCATGAA GCTCGGCGGC GCGAACTATG TGCTCTGGGG CGGGCGCGAG GGCTATGAGA CGCTGCTCAA CACCGACCTC ACCCGCGAGG CCGAGAATGC GGGCCGCTTC CTGCAGATGG TGGTGGACTA CAAGCACAAG ATCGGTTTCC AGGGCACGAT CCTGATCGAG CCGAAGCCGC AGGAGCCCTC GAAGCACCAG TACGACTATG ACGTGGCGAC GGTCTACGGC TTCCTCAAGC GCTTCGGCCT TGAGAAGGAG GTGAAGCTCA ACATCGAGCA GGGCCATGCG ATCCTCGCCG GCCACAGTTT CGAGCACGAG CTGGCGTTGG CGGCGAGCCT CGGCATCCTC GGCTCGATCG ACATGAACCG GAACGACTAT CAGTCGGGCT GGGACACCGA TCAGTTCCCG CACAACCACC CCGAGATGGC CTTGGCCTAT TACGAGATCC TGCGGGCGGG CGGCTTCACC ACGGGCGGCA CGAACTTCGA CGCGAAGATC CGCCGCCAGA GCCTCGATCC CGAGGATCTC GTGCTGGCCC ATGTGGGTGG CATGGACACC TGCGCCCGTG CGCTGAAGGC CGCGGCGCGG CTCTATGAGG ACGGAAGCCT CGAGGCGGCC CGCGCCGCGC GCTATGCGGG CTGGGAAACG CCCGAGGCGC AGGCGATGCT CGCCTCGTCG CTGGAGGAGA TCGAGGCCCG CGTGCTGGCC GAGGGGATCA ACCCCGAGCC GCGCTCGGGC CGGCAGGAGC GGCTGGAAAA CCTCTGGAAC CGCTTCGTCT GA
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Protein sequence | MTDFFAGIPQ IRYEGEGSSN EFAFRHYNPD EVILGKRMEE HLRFAVAWWH SFAWPGGDPF GGQTFNRPWF GDTLDLAKLK ADVAFEMFDI LGAPFFCFHD ADIRPEGATF AESKRNLEEI VDHIGTRMEG SKTKLLWGTA NLFSHRRFMS GAATNPDPDV FAWSAATVKG CMDATMKLGG ANYVLWGGRE GYETLLNTDL TREAENAGRF LQMVVDYKHK IGFQGTILIE PKPQEPSKHQ YDYDVATVYG FLKRFGLEKE VKLNIEQGHA ILAGHSFEHE LALAASLGIL GSIDMNRNDY QSGWDTDQFP HNHPEMALAY YEILRAGGFT TGGTNFDAKI RRQSLDPEDL VLAHVGGMDT CARALKAAAR LYEDGSLEAA RAARYAGWET PEAQAMLASS LEEIEARVLA EGINPEPRSG RQERLENLWN RFV
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