Gene Rsph17029_2821 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_2821 
Symbol 
ID4897263 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009049 
Strand
Start bp2969819 
End bp2970616 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content71% 
IMG OID640113424 
Product3-deoxy-manno-octulosonate cytidylyltransferase 
Protein accessionYP_001044695 
Protein GI126463581 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1212] CMP-2-keto-3-deoxyoctulosonic acid synthetase 
TIGRFAM ID[TIGR00466] 3-deoxy-D-manno-octulosonate cytidylyltransferase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGTCC TGATCGCCAT CCCCGCCCGC TACGCCTCGA CCCGCTACCC GGGCAAGCCG 
CTCGTCGCGC TCCGCGACCC GGACGGCACC GAGAAGACCC TGATCCGCCG CAGCTGGGAG
GCGGCGATGG CGGTACGCGG CATCGACCGC GTGGTGGTCG CGACCGACGA CGACCGCATC
CGCACGGCGG CCGAGGCGTT CGGCGCCGAG GTGGTCATGA CCTCTCCCGA CTGTCGCAAC
GGCACCGAAC GCTGCGCCGA GGTGGCGGCG GCGCTGCCGG GCTACGAGAT CGTGGTAAAC
CTGCAGGGCG ACGCCCCGCT CACGCCCTCG TGGTTCATCG AGGAGCTGGT GGCGGGCCTG
CGCGAGGATC CTTCCGCAGA GCTGGCGACG CCGGTCCTGC GCTGCGACGG GCGGGCGCTG
AACGGCTTTC TGACCGACCG TCGCGCGGGC CGCGTCGGCG GCACCACCGC CGTCTTCGGC
GCCACGCGCC ACGCGCTCTA TTTCTCGAAG GAAGTGATCC CCTACACCGG TCGCGTCTAC
GGCGACGCCG AGGAGACGCC GGTCTTCCAT CATGTCGGCG TCTATGCCTA CCGGCCCGCG
GCGCTGGCGG CCTATCCTTC CTGGCCCATC GGCCCGCTGG AAGAGCTGGA GGGGCTCGAG
CAGCTCCGTT TCCTCGAGAA CGGCCGGTCG GTGCTCTGCG TCGAGGTCGA GGCCCGCGGG
CGTCAGTTCT GGGAGCTCAA CAATCCCGAG GATGTGGCGC GGATCGAGAC CATGCTGGCC
GAGATGCAGC GCGGCTGA
 
Protein sequence
MSVLIAIPAR YASTRYPGKP LVALRDPDGT EKTLIRRSWE AAMAVRGIDR VVVATDDDRI 
RTAAEAFGAE VVMTSPDCRN GTERCAEVAA ALPGYEIVVN LQGDAPLTPS WFIEELVAGL
REDPSAELAT PVLRCDGRAL NGFLTDRRAG RVGGTTAVFG ATRHALYFSK EVIPYTGRVY
GDAEETPVFH HVGVYAYRPA ALAAYPSWPI GPLEELEGLE QLRFLENGRS VLCVEVEARG
RQFWELNNPE DVARIETMLA EMQRG