| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_2781 |
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| Symbol | |
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| ID | 4895512 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009049 |
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| Strand | + |
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| Start bp | 2927730 |
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| End bp | 2929451 |
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| Gene Length | 1722 bp |
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| Protein Length | 573 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640113383 |
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| Product | type I secretion system ATPase |
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| Protein accession | YP_001044655 |
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| Protein GI | 126463541 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4618] ABC-type protease/lipase transport system, ATPase and permease components |
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| TIGRFAM ID | [TIGR01842] type I secretion system ABC transporter, PrtD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.333574 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGACC CCGCCGAACC GGCCGGCCTC TACCGGCTCA TCCTGCGCGA GGCAGCTCTT
GGGGCGGGGG CGGCAGCCTT TGTGGGCTTC TTCGTGAATC TCCTCCACCT CGCCTTGCCG
CTCTATAATG CGCAGGTTTA CGACCGGGTG ATCGGCAGCG CCAATCTCGA CACGCTGGTG
GCCCTCACCG GGCTGGTCGC GATCCTGCTC GTCTTCGGCG CGGTCCTCGA CGTGCTGCGG
GCCCGGATCT TCGCGATCCT CGCGGCGCGG CTGGCCGGAC AGCTCGGCCA GCCCGTCTTC
GTGGCAGCGG TCGAGACCGC GCTCCGTGGC GGCCCCACCG CTGCGGCCGA GGGGATGCGC
GCCGTGGCCG ACCTCCGCAG CTTCCTCGCG GGCGGGGCCA TCGCGCTGCC GATCGACCTG
ACCTTCACTC CGGTCCTCCT CTTGGTTCTC TTCGCCCTCG ATCCGGCCTA CGGCCTGATC
GGTCTCGGCG GGGCCGCCGC TCTGGCCGGG ACGGGCATCG TGACGGAGAT CCTCGCCCGC
CGCCCCGTGG CCAGCGCGCT CGCGGCGGGC GGCAGCGTGC AGGCCGAGAC CGCGACCGCC
CTGCGCAGCG CCGAAGTCAT TGCAGCCATG GGAATGCTGC CAGACATCGC CCGGCGCTGG
CGAAGGGCTC AGGCGCGGTC GCTCGCGGCC GCCGATCGCG GGCAGGCGCG GGCCAAGGCC
CTGTCCTCGC TGGCGCGCTT CCTCCGCACC GCCATCCAGA TCGCCGTGAT CTGCACCGGC
ACGACCCTTG TCGTCGATCA GGCCGCCACC ATCGGCACCA TCGTGGCGGC CATGGCGATC
ATGTCCCGCC TGCTCCTGCC GTTCGAGCAT CTGATCGACG GCTGGCGGCA ATGGATGGAT
GCGGCCGAGG CGCACGGTCA GCTGCGGCGC CTCCTGCGAG AGGGCGGCAG CCCCCGCTCG
TCCCTGCCCG CACCAGTCGG GCGCGCGCTG CTGGTGGCCG ACCGCGTCAC CTATATCCCC
GCGGGCCAGG ACCTGCCCCT TCTGCGCAAC GTCTCGTTCC GCATCGAACC CGGCGAGCTC
CTCGGCGTCA TCGGCCCGTC GGGCGCAGGC AAATCGACGC TCGCGCGGCT GACGGTCGGT
CTCTGGCCGC CCAGCGCCGG CGGTCTTTTC CTCGACGGAC AAAGCACCTT TCTCCACGAA
CGGACGAGCT TCGGACGCGC GGTGGGCTAT CTGCCGCAGG AGCCGCTTCT GCTCGACGGC
AGCGTGCGCG ACAACATCGC GCGCTTCCGG GACGCGCCGA TGGACGAGGT GATCGCCGCC
GCCCGGCAGG CCGGCGTGCA CGAGCTGATC GGCCGCCTTC CGAGGGGCTA CGGCACGCGG
CTTGCCGATG CCGGCGCGCG GCTGAGCGGC GGACAGCGCC AGCGGATCGC GCTCGCCCGG
GCCATCTTCG GCGACCCGCA GCTTCTCGTG CTCGATGAAC CGAATGCCAG CCTCGATGCG
GAAGGCGAGG CCGCGCTGGT CTCGGCCGTC GAGCAGGCGC GGGCGCGCGG CGCGGCGGTG
CTCGTGGTGG CGCAGCGGAT GTCGGTGCTG GCCAAGGCCG ACCGGCTGCT CGTGCTACGC
GAAGGGGCCG TGACCCATTA CGGGCCTCGG GCAGAGGTGA TGGCCGCCAT CGGACCGCAA
CGACGCCCCG CCCCGGTCCC GGTTGCGCAG GCGTGCTCAT GA
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| Protein sequence | MADPAEPAGL YRLILREAAL GAGAAAFVGF FVNLLHLALP LYNAQVYDRV IGSANLDTLV
ALTGLVAILL VFGAVLDVLR ARIFAILAAR LAGQLGQPVF VAAVETALRG GPTAAAEGMR
AVADLRSFLA GGAIALPIDL TFTPVLLLVL FALDPAYGLI GLGGAAALAG TGIVTEILAR
RPVASALAAG GSVQAETATA LRSAEVIAAM GMLPDIARRW RRAQARSLAA ADRGQARAKA
LSSLARFLRT AIQIAVICTG TTLVVDQAAT IGTIVAAMAI MSRLLLPFEH LIDGWRQWMD
AAEAHGQLRR LLREGGSPRS SLPAPVGRAL LVADRVTYIP AGQDLPLLRN VSFRIEPGEL
LGVIGPSGAG KSTLARLTVG LWPPSAGGLF LDGQSTFLHE RTSFGRAVGY LPQEPLLLDG
SVRDNIARFR DAPMDEVIAA ARQAGVHELI GRLPRGYGTR LADAGARLSG GQRQRIALAR
AIFGDPQLLV LDEPNASLDA EGEAALVSAV EQARARGAAV LVVAQRMSVL AKADRLLVLR
EGAVTHYGPR AEVMAAIGPQ RRPAPVPVAQ ACS
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