Gene Rsph17029_2756 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_2756 
Symbol 
ID4895563 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009049 
Strand
Start bp2897310 
End bp2897951 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content72% 
IMG OID640113358 
Productanti-ECFsigma factor, ChrR 
Protein accessionYP_001044630 
Protein GI126463516 
COG category[T] Signal transduction mechanisms 
COG ID[COG3806] Anti-sigma factor 
TIGRFAM ID[TIGR02451] anti-sigma factor, putative, ChrR family 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATCC GGCACCATGT TTCCGACGCC CTGCTGACCG CCTATGCGGC GGGCACGCTT 
TCCGAAGCCT TCTCTCTGGT GGTGGCCACG CACTTGTCGC TCTGCGACAA GTGCCGGGCC
CGCGCCGGCG CGCTCGACGC GGTGGGGGGC AGCCTGATGG AAGAGACGGC GCCGGTCGCG
CTCTCCGAGG GCAGCCTCGC CTCCGTCATG GCCCGGCTCG ACCGGCAGAT CCAGAGGCCC
GCCCCGGTGC GCCGCGCCGA TCCGCGCGCG CCCGCGCCGC TGGCCGATTA TGTGGGCCGG
CGGCTCGAGG ACGTCCGCTG GCGTACCCTC GGCGGCGGCG TGCGGCAGGC GATCCTGCCG
ACGGGAGGAG AGGCCATCGC CCGGCTGCTC TGGATCCCCG GCGGGCAGGC GGTGCCGGAT
CACGGCCACC GCGGGCTCGA GCTGACGCTC GTCCTGCAGG GCGCCTTCCG TGACGAGACC
GACCGGTTCG GCGCCGGCGA TATCGAGATC GCGGATCAGG AGCTGGAACA TACGCCGGTG
GCCGAGCGGG GCCTCGACTG CATCTGCCTC GCCGCCACCG ATGCGCCGCT GCGCTTCAAC
AGCTTCCTGC CGAAGCTGGT GCAGCCCTTC TTCCGCATCT GA
 
Protein sequence
MTIRHHVSDA LLTAYAAGTL SEAFSLVVAT HLSLCDKCRA RAGALDAVGG SLMEETAPVA 
LSEGSLASVM ARLDRQIQRP APVRRADPRA PAPLADYVGR RLEDVRWRTL GGGVRQAILP
TGGEAIARLL WIPGGQAVPD HGHRGLELTL VLQGAFRDET DRFGAGDIEI ADQELEHTPV
AERGLDCICL AATDAPLRFN SFLPKLVQPF FRI