| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_2728 |
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| Symbol | |
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| ID | 4896502 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009049 |
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| Strand | - |
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| Start bp | 2871750 |
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| End bp | 2872481 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640113330 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001044602 |
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| Protein GI | 126463488 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0711669 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCGAAC AGAAGACGAT GGTGCTGACC GGCGCCAGCC GCGGCATCGG CCACGCAACG
GTCAAGAGAT TCTCGCGCGA GGGCTGGCGG GTGCTGACCT GCTCGCGTCA GCCGTTCGAT
CCGCGCTGCC CCTGGCCCGG CGGCGAGGAG AACCATATCC AGGTCGATCT CGCCAATCCC
GACATGACCA TCCGGGCCAT CGAGGCGATC AAGGACAAGA TCGACGGCCG GCTCCATGCG
CTCGTCAACA ATGCGGGCGT CTCGCCGAAG GGGCCGAAGG GTGAGCGGCT GAGCACGATC
ACCACGGACC TGCGCACCTG GGGGCAGGTG TTCCACGTCA ATTTCTTCGC CTGTGTCGTG
CTGGCCCGCG GCCTGCAGGA AGAGTTGACA GCCGGCAAGG GCTCGATCGT CAACGTGACC
TCGATCGCGG GCAGCCGGGT GCATCCGTTC GCGGGCGCGG CCTATGCCAC CTCGAAGGCG
GCGCTGGCGG CGCTCACGCG CGAGATGGCG CACGATTTCG GGCCGCTCGG CGTGCGGGTG
AATGCGCTTG CGCCCGGTGA GGTCGAGACC GCGATCCTCT CGCCCGGCAC CGACAAGATC
GTCGAGAAGC TGCCGCTGCA GCGGCTCGGC CAGCCGAGCG AGGTCGCGGA TGCGATCTGG
TTCCTCTGCT CGGACCAGTC GAGCTACATC TCGGGCGCCG AGATCGAGGT CAACGGCGCC
CAGCACGTCT GA
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| Protein sequence | MGEQKTMVLT GASRGIGHAT VKRFSREGWR VLTCSRQPFD PRCPWPGGEE NHIQVDLANP
DMTIRAIEAI KDKIDGRLHA LVNNAGVSPK GPKGERLSTI TTDLRTWGQV FHVNFFACVV
LARGLQEELT AGKGSIVNVT SIAGSRVHPF AGAAYATSKA ALAALTREMA HDFGPLGVRV
NALAPGEVET AILSPGTDKI VEKLPLQRLG QPSEVADAIW FLCSDQSSYI SGAEIEVNGA
QHV
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