Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_2724 |
Symbol | |
ID | 4898040 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009049 |
Strand | + |
Start bp | 2866849 |
End bp | 2868375 |
Gene Length | 1527 bp |
Protein Length | 508 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640113326 |
Product | diguanylate cyclase/phosphodiesterase |
Protein accession | YP_001044598 |
Protein GI | 126463484 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2200] FOG: EAL domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.06884 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGCTCT CGGGCCGATC ATCCTCCGGT CTCGGACGCG CGGGACAGCT GCTGCGCCGG CCCGAGGTCC TGGCCTTCCT GCCCGCCCTG TCGCTGCTCG CCTACTGGCT CGGGGGCGAG CGGACCCTCG TGTTCGTCGC ACTCGGCCTG CCGCTGTTCT ACGCGACGGT GGGCGCCTTC CGCCCGGCCG CGCCGTCCGT GACGCCCGAC GGGCTGGCGC TGCGCCCGCA GGTGATCGCG TCGCTCGACC GGATGCTTCA GGACCGCGAA AGCACGGGAC GGACGACGGC CTGCCTCGTG CTGCAGTTCG ACGGGATGGA CAAGCTTCTC GACCGGCACG GGCGTGCCGC GCAGTCGGAG GTGCTGGCCC GCTGCTGCGA CCGGCTGTGC AGCGCCCTGC GGGAAGGCGA TACGGTGGCC CGGCTGGAAG GCGGCGGCCT TGCCGTGGCC CTGCATCCGG TGCGCCGGCT CGACCTTCAG TCGGTGGTGC TGCTGGCGGG CCGTCTGCAA ACCGCGATCG CGGCTCCGAT CAGCGTGGAG GGCACGCGGA TCCATGTGAC CTGCTCGATC GGCTTCTGCC TGGCGGAGCG CACGCCCGCG CCCACCGGGC GTGCGCTGCT CGATGCGGCG CAGGTGGCGG CAGACGAGGC CAGCCGGAAC GGCCCCGGCG CCGTGCGCGC CTATGCCCTC GGCATGAGCC GCAACCGCGC CGACCGGGAC GCCTACCGGG GGCTTCTGGA GACCGCCCTC GACACCGGCC AGTTCACGGG CTGGTTCCAG CCGCAGATCC GCACCGAGGA CGGTGCCATA GGCGGGTTCG AGGTCCTCTC GCGCTGGCAG CATCCCGAGC GCGGACTGCT CCTCCCGCAG GATTTTCTGC CCGCCATCGA GCGGGCGGGC CTCTCCGAAC GGCTGGGCGA GGTCATGCTC TTCCAGGCGC TCACCGCCCT GCGCCACTGG GACCGTGCCG GTCTCTGCGT CCCCTGCGTC GCGGTGAACT TCTCGGCCAC CGATCTTCGC AACCCGCGCC TCGTCGACCG GCTGAAGTGG GAGCTCGACC GATTCGAGCT GACGCCCGCG CGCCTCTCGG TCGAGATCCT CGAGACGGTG GTCGCCGAGG GCGCGAGCGA CGTCGTCGTT CACAACATCG CGGGCCTCTC CGCCTGCGGC TTCGGGGTCG ATCTCGACGA CTTCGGCACC GGCCACGCCT CCATCACTAC GATCCGCCGC TTCGCCCTCC GGCGGCTGAA GATCGACCGC AGCTTCGTGA CACGGGCCGA TTCCGACGCG GCCCAGCGGA CGATGCTGGC CGCGATCATT TCCATGGCGC GACAACTCGG GCTCGAGACA CTGGCTGAAG GTGTGGAAAC GCCGGGAGAA CTGGCCACGC TCACCGCGCT CGGCTGCGGC TACCTGCAGG GCTATGCCAT CGCCCGCCCG ATGCCGCTTT CGGACGCCAC CGCCTGGCTG GAGAACCGGC GGGTGCGCCT GCCCCCTGCC GCCCGGTGCG CAACGCCCGG TTCCTGA
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Protein sequence | MQLSGRSSSG LGRAGQLLRR PEVLAFLPAL SLLAYWLGGE RTLVFVALGL PLFYATVGAF RPAAPSVTPD GLALRPQVIA SLDRMLQDRE STGRTTACLV LQFDGMDKLL DRHGRAAQSE VLARCCDRLC SALREGDTVA RLEGGGLAVA LHPVRRLDLQ SVVLLAGRLQ TAIAAPISVE GTRIHVTCSI GFCLAERTPA PTGRALLDAA QVAADEASRN GPGAVRAYAL GMSRNRADRD AYRGLLETAL DTGQFTGWFQ PQIRTEDGAI GGFEVLSRWQ HPERGLLLPQ DFLPAIERAG LSERLGEVML FQALTALRHW DRAGLCVPCV AVNFSATDLR NPRLVDRLKW ELDRFELTPA RLSVEILETV VAEGASDVVV HNIAGLSACG FGVDLDDFGT GHASITTIRR FALRRLKIDR SFVTRADSDA AQRTMLAAII SMARQLGLET LAEGVETPGE LATLTALGCG YLQGYAIARP MPLSDATAWL ENRRVRLPPA ARCATPGS
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