| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_2662 |
|---|
| Symbol | pyrB |
|---|
| ID | 4896579 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17029 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009049 |
|---|
| Strand | + |
|---|
| Start bp | 2807403 |
|---|
| End bp | 2808365 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640113263 |
|---|
| Product | aspartate carbamoyltransferase catalytic subunit |
|---|
| Protein accession | YP_001044536 |
|---|
| Protein GI | 126463422 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0540] Aspartate carbamoyltransferase, catalytic chain |
|---|
| TIGRFAM ID | [TIGR00670] aspartate carbamoyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.16929 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.7579 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCTTCC GCGCCCGCCA CCTGCTCGGC ATCGAGCATC TGGCCCCCGA CGAGATCCGC
TCCGTCCTCG ACCTCGCCGA CAGTTATGTG GACCTCAACC GCCGCACGAT GAAGCAGTCG
GACGCGCTGG CGGGGATGAC CCAGATCAAC ATGTTCTTCG AGAATTCGAC CCGCACCCAG
TCGAGCTTCG AGCTTGCGGG CAAGCGGCTC GGGGCGGATG TGATGAACAT GGCGGTGGCG
CAGAGTTCGG TGAAGAAGGG CGAGACGCTC CTTGACACCG CCATGACGCT GAACGCGATG
CACCCCGATC TCCTCGTGGT GCGCCACCCG GCCTCGGGGG CGGTCAACCT CCTGGCCTCC
AAGGTGAACT GCGCCGTCCT CAACGCGGGC GACGGGCGGC ACGAACATCC GACGCAGGCG
CTTCTCGATG CGCTCACCAT CCGCCGCGCC AAGGGCCGCA TCCAGCGCCT GACCGTCGCC
ATCTGCGGCG ACATCGCCCA CAGCCGGGTC GCGCGCTCGA ACCTGATCCT GCTCGGCAAG
ATGGAGAACC GCGTGCGCCT GATCGCGCCG CCCACGCTGA TGCCGCCGGG GGTGGGCGAG
TTCGGCTGCG AGCTTTACGA CGACATGAAG AAGGGCCTCG AAGGCGCCGA TGTGGTGATG
ATGCTGCGCC TCCAGAAAGA GCGGATGGAC GGGGCCTTCA TCCCTTCCGA GCGCGAATAC
TATCACCGCT TCGGTCTCGA CGCCGAGAAG CTCGCCTTCG CCAAGGAGGA TGCGATCGTC
ATGCATCCGG GCCCGATGAA CCGCGGTGTC GAGATCGACG GCACGCTCGC CGACGACATC
AACCGCTCGG TGATCCAGGA TCAGGTCGAG ATGGGGGTGG CGGTGCGCAT GGCCTGCATG
GATCTTCTGG CGCGGAACCT GCGCGCCGAA CGGGGCCGCG CGGCCGTGGG GGTGATGGCA
TGA
|
|---|
| Protein sequence | MTFRARHLLG IEHLAPDEIR SVLDLADSYV DLNRRTMKQS DALAGMTQIN MFFENSTRTQ
SSFELAGKRL GADVMNMAVA QSSVKKGETL LDTAMTLNAM HPDLLVVRHP ASGAVNLLAS
KVNCAVLNAG DGRHEHPTQA LLDALTIRRA KGRIQRLTVA ICGDIAHSRV ARSNLILLGK
MENRVRLIAP PTLMPPGVGE FGCELYDDMK KGLEGADVVM MLRLQKERMD GAFIPSEREY
YHRFGLDAEK LAFAKEDAIV MHPGPMNRGV EIDGTLADDI NRSVIQDQVE MGVAVRMACM
DLLARNLRAE RGRAAVGVMA
|
|---|
| |