Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_2636 |
Symbol | sdhA |
ID | 4897670 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009049 |
Strand | + |
Start bp | 2782943 |
End bp | 2784745 |
Gene Length | 1803 bp |
Protein Length | 600 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640113236 |
Product | succinate dehydrogenase flavoprotein subunit |
Protein accession | YP_001044510 |
Protein GI | 126463396 |
COG category | [C] Energy production and conversion |
COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup [TIGR01816] succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGCTT ACACTTACGA GACGCATGAC TACGACGTCG TGGTGGTGGG CGCCGGCGGC GCCGGCCTCC GCGCGACGCT CGGCATGGCC GAACAGGGCC TGCGCACCGC CTGCGTCACC AAGGTTTTCC CCACGCGCAG CCACACGGTG GCGGCGCAGG GCGGCATCGC CGCCTCGCTC GCCAACATGG GCCCGGACAA CTGGCAGTGG CACATGTACG ACACCGTGAA AGGGTCGGAC TGGCTGGGCG ACACGGACGC GATGGAATAT CTCGCCCGCG AGGCCCCGAA GGCGGTCTAC GAGCTCGAGC ATTACGGCGT GCCCTTCTCG CGCACCGAGG AAGGCAAGAT CTACCAGCGC CCGTTCGGCG GCCACACCAC CCAGTTCGGC GAAGGCCCGC CCGTGCAGCG CACCTGCGCC GCGGCCGACC GCACCGGCCA CGCGATCCTG CACACGCTCT ACGGCCAGTC GGTCAAGAAC AACGCCGAGT TCTTCATCGA ATATTTCGCG CTGGATCTCA TCATCCAGGA CGGCCGCTGC ACCGGCGTGG TGGCGTGGAA GCTGGAAGAC GGCACGATCC ATGTCTTCAA CGCCAAACTC ACGGTTCTGG CCACGGGCGG CTACGGCCGC GCCTATTTCT CGGCCACCTC GGCCCACACC TGCACCGGCG ACGGCGGCGG GATGGTGGCG CGCGCCGGCC TGCCCTTGCA GGACATGGAG TTCGTGCAGT TCCACCCGAC CGGCATCTAC GGCTCGGGCT GCCTCATCAC CGAGGGCGCG CGCGGCGAGG GCGGCTACCT CACCAACTCG AACGGCGAAC GGTTCATGGA GCGCTACGCT CCGACCTACA AGGATCTGGC CTCCCGCGAC GTGGTCAGCC GCTGCATGAC GCTCGAGATC CGCGAGGGCC GCGGCGTGGG CGAGCATGGC GACCATATCC ACCTGCACCT GAACCACCTG CCGCCCGAGA CGCTGGCCCT GCGCCTGCCG GGCATCTCGG AATCGGCCAA GATCTTCGCG GGGGTCGACC TCCACAAGGA GCCGATCCCG GTGCTGCCGA CCGTGCATTA CAACATGGGC GGCATCCCCA CCAACTACTG GGGCGAGGTG CTGGCGCCAA CCGAGGGCGA TCCCGACCGC GTCTTCCCCG GCCTCATGGC CGTGGGCGAG GCGGGCTGCG CCTCAGTGCA CGGGGCGAAC CGCCTCGGCT CGAACTCGCT GATCGACCTC GTGGTCTTCG GCCGCGCCGC GGCGATCCGC GCAGGTCAGA TCGTGAAGCC GCACGAGTTC CATCCCGACG TGCCGAAGGT CCAGGTGGAC GAGATCCTCG GCCGGTTCGA CGATCTGCGC CACGCGAACG GCGCGGTGCC GACGGCCGAA CTGCGGCTCG AGATGCAGCG CACCATGCAG GCCGACGCGG CGGTGTTCCG CACCGACAAG ACGCTGGCCG AAGGCGTCGA GAAGATGAAG GGCATCGCGG CGAAGCTCGG GGACCTGAAA GTCACCGACC GCAGCCTCAT CTGGAACTCG GACCTGATGG AGACGCTCGA ACTCACCAAC CTCATGCCGA ACGCGCTCGC CACCATCGTC GCGGCCGAGG CGCGCAAGGA GAGCCGCGGG GCGCATGCCC ACGAGGACTG GCCCAACCGC GACGACGAGA ACTGGCGCGT GCACAGCCTC GCGGTCGTGA AGGGCAACGA GGTCACGCTG ACCACCCGGC CCGTCCATCT CGATCCGCTC ACGAAGCAGA CCGAGGGCGG GATCGATCTG AAGAAGATCG CCCCCAAGGC GCGGGTCTAC TGA
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Protein sequence | MAAYTYETHD YDVVVVGAGG AGLRATLGMA EQGLRTACVT KVFPTRSHTV AAQGGIAASL ANMGPDNWQW HMYDTVKGSD WLGDTDAMEY LAREAPKAVY ELEHYGVPFS RTEEGKIYQR PFGGHTTQFG EGPPVQRTCA AADRTGHAIL HTLYGQSVKN NAEFFIEYFA LDLIIQDGRC TGVVAWKLED GTIHVFNAKL TVLATGGYGR AYFSATSAHT CTGDGGGMVA RAGLPLQDME FVQFHPTGIY GSGCLITEGA RGEGGYLTNS NGERFMERYA PTYKDLASRD VVSRCMTLEI REGRGVGEHG DHIHLHLNHL PPETLALRLP GISESAKIFA GVDLHKEPIP VLPTVHYNMG GIPTNYWGEV LAPTEGDPDR VFPGLMAVGE AGCASVHGAN RLGSNSLIDL VVFGRAAAIR AGQIVKPHEF HPDVPKVQVD EILGRFDDLR HANGAVPTAE LRLEMQRTMQ ADAAVFRTDK TLAEGVEKMK GIAAKLGDLK VTDRSLIWNS DLMETLELTN LMPNALATIV AAEARKESRG AHAHEDWPNR DDENWRVHSL AVVKGNEVTL TTRPVHLDPL TKQTEGGIDL KKIAPKARVY
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