| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_2609 |
|---|
| Symbol | |
|---|
| ID | 4897229 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17029 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009049 |
|---|
| Strand | - |
|---|
| Start bp | 2748947 |
|---|
| End bp | 2749729 |
|---|
| Gene Length | 783 bp |
|---|
| Protein Length | 260 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640113209 |
|---|
| Product | HAD family hydrolase |
|---|
| Protein accession | YP_001044483 |
|---|
| Protein GI | 126463369 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1877] Trehalose-6-phosphatase |
|---|
| TIGRFAM ID | [TIGR00685] trehalose-phosphatase
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACCAAC CTGCCCTGCA TCCCGACCAA GATGACGGCG CGGCGGTTCT GCGATCCGCG
CTGCGCGATG CGCCCGACGA GTGGGCGCTC TTTCTCGACA TCGACGGGAC GCTGGTCGAC
ATCGCCGAGC AGCCGCACGA CGTGCGCGTG GCCGCGGGTC TGCCGCAGGA TCTGGCGCGA
CTGGCCGACC GGCTCGGGGG GGCTCTGGCT CTCGTGACCG GGCGGCGGGT CGACTGGATC
GACGCCCACT TCGGGCCGCA TCTCTTCCCT GCCGCGGGTC TTCACGGGGT CGAGCGCCGC
CGCGCCTCGG GAGAACTCGA CCGCGCGGGC CTCGCGCCGT CCCTGAACGC GCTGCGCAAG
GATCTGGGGC GGCGCACGGC GCGGATGCCC GGCGTCCTCC TCGAGGACAA GGTGGCTGCG
GTGGCGCTGC ATTACCGGCA GGCGCCCGAA CGCGAGCCCG ATGTGCGGGC GATGATGGAA
ATGGCTTTGA AGGTGATGGG AGACGGTTGG GTGCTGCAGC ACGGCAAGAT GGTGGTGGAA
CTGCGGCCGG CCTCGGCCAA CAAGGGCACG GCGCTCGAGG CCTTTCTGGC GGAGCCGCCC
TTCGCCGGGC GGAGGCCCGT TGCGATAGGC GACGACGTGA CCGACGAGGA GATGTTCCGG
GTGGTCAATA CCTGCGGCGG CCTCTCGGTG CGGATCTGCG AGACCGAGGC GCCGACGCTG
GCCCGGGCGC GGCTCGCCTC GCCGCAGGCG CTCCGCGACC TCGTGGCGGA GCTCGGCGCA
TGA
|
|---|
| Protein sequence | MHQPALHPDQ DDGAAVLRSA LRDAPDEWAL FLDIDGTLVD IAEQPHDVRV AAGLPQDLAR
LADRLGGALA LVTGRRVDWI DAHFGPHLFP AAGLHGVERR RASGELDRAG LAPSLNALRK
DLGRRTARMP GVLLEDKVAA VALHYRQAPE REPDVRAMME MALKVMGDGW VLQHGKMVVE
LRPASANKGT ALEAFLAEPP FAGRRPVAIG DDVTDEEMFR VVNTCGGLSV RICETEAPTL
ARARLASPQA LRDLVAELGA
|
|---|
| |