| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_2605 |
|---|
| Symbol | |
|---|
| ID | 4897136 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17029 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009049 |
|---|
| Strand | + |
|---|
| Start bp | 2745378 |
|---|
| End bp | 2746385 |
|---|
| Gene Length | 1008 bp |
|---|
| Protein Length | 335 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640113205 |
|---|
| Product | putative DNA topoisomerase I protein |
|---|
| Protein accession | YP_001044479 |
|---|
| Protein GI | 126463365 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3569] Topoisomerase IB |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGGACG GCAGCGAGGC CATCGTGCCG CGCGGCCTCG TCTATGTCAC CGATGCCGAG
CCCGGCATCA CCCGGCGGCG CTGCGGGCGC GGCTTCGTCT TCCGCGGCCC CGACGGCAGG
CTTCTCGACC GCGCCGAGCG CGCACGCATT CTGCGCCTCG GGGTCCCGCC CGCCTACGAG
AAGGTGTGGA TCTGCCCGCT CGAGAACGGC CATCTGCAGG CCACCGGGTT CGATGCGCGC
GGGCGCAAGC AGTATCGCTA CCACCCCGAC TGGGGCAGCT GGCGGTCGCA GGCGAAATAC
GCCCTCCTGC CGGCCTTCGG CGAGGCGCTG CCCCGCCTGC GCCGCCGCGT GGCCCGCGAC
CTCAAGGCCG AGGCGGGCGA GCTCGCCTTC TCGCTCGCGG CCCTCACCAT GCTGATCGAC
CGGACCTTCC TGCGCGTGGG CAGCTCGGCC TATGCCGAGG AGAACAAGAC CTTCGGCGCC
ACCACGCTTC TGGCGCGCCA TGTGAAGCTC AAGGACGGCG AGGTGCGGCT CGACTTCCGC
GCCAAGGGCG GCAAGCGCGT GCGTCAGGTG CTGAAGGACC GCCGCCTGCA CCGCATCCTG
CAGGAGATCG AGGACCTGCC GGGCCGCAAC CTCTTCACCT GGATCGACGA GGAGAGCCAG
GTGCGGCGCG TGGCTTCGCA CCATGTGAAC GACTATCTGG CCGAGGCCAC GGGCCTTGCG
GGTGCTTCCG CCAAGACCTT CCGCACCTGG GGCGGCTCGC TCGCCGCCTT CGCCGTGGCC
CGAGCGACCG AGGGCAAGCT CACCGTGAAG ATGATGGCCG AAGGCGCGGC CGAGCGGCTG
CACAACACGC CGACGATCAG CCGCACATCC TACATCCATC CCCGGATCCT CGGCCTGGCG
GACCTGAACC CCGACGAGCG GCTCGCGCAG CTCGAGGCGG TCCAGCCCGC CGACCTGCCC
GACCTGCGCA GCGACGAGCG CCGGATGCTC GGCTTCCTGC TGGGCTGA
|
|---|
| Protein sequence | MSDGSEAIVP RGLVYVTDAE PGITRRRCGR GFVFRGPDGR LLDRAERARI LRLGVPPAYE
KVWICPLENG HLQATGFDAR GRKQYRYHPD WGSWRSQAKY ALLPAFGEAL PRLRRRVARD
LKAEAGELAF SLAALTMLID RTFLRVGSSA YAEENKTFGA TTLLARHVKL KDGEVRLDFR
AKGGKRVRQV LKDRRLHRIL QEIEDLPGRN LFTWIDEESQ VRRVASHHVN DYLAEATGLA
GASAKTFRTW GGSLAAFAVA RATEGKLTVK MMAEGAAERL HNTPTISRTS YIHPRILGLA
DLNPDERLAQ LEAVQPADLP DLRSDERRML GFLLG
|
|---|
| |