| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_2596 |
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| Symbol | |
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| ID | 4895113 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009049 |
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| Strand | + |
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| Start bp | 2734813 |
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| End bp | 2736489 |
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| Gene Length | 1677 bp |
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| Protein Length | 558 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640113196 |
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| Product | alpha amylase, catalytic region |
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| Protein accession | YP_001044470 |
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| Protein GI | 126463356 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | [TIGR02456] trehalose synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCGATG CGGATCTGGG CAGGCTGAGG ATGGATATCA GCCGCACGAG CGATGTCTGG
TGGAAGAACG CCGTCTTCTA TTGTCTCGAT GTCGAGACCT TTCAGGACAG CAACGGCGAC
GGGATCGGGG ATTTCGCGGG GCTGACCCGG CGGCTCGACC ATCTCGACCG GCTGGGGGTG
AGCTGCATCT GGCTGATGCC CTTCTATCCC AGCCCGAACC AGGACGATGG CTACGACATC
ACCGACTATT ACTCCGTCGA TCCCCGCCTC GGCACGCTGG GAGATTTCGT CGAATTCCTG
CGCGCGGCCC ATGACCGCGG GATGCGGGTG ATCGCGGACC TCGTGGTGAA CCACACCTCG
CGCGAACATC CGTGGTTCCA AGCCTCGCGC GCCGATCCCG ATTCGCCCTA CCGCGACTGG
TATGTCTGGC GCGACGAGAA ACCCGAGGAG GATGCGGCCT CGCTGGTCTT CCCCGGAGAA
GAGAACAGCA GCTGGACCTG GGACGCGAAG GCCGGGAAAT ACTATCTGCA CCGCTTCTAC
AGCCACCAGC CGGACCTGAA TGTCGAGAAC CGCGCGGTGC GCGACGAGAT CCAGCGGATC
GTGGGCTTCT GGCTCCAGCT CGGCCTGTCG GGCTTCCGCG TGGATGCCGT GCCCTTCCTG
CTCGAGCAGA TGTCGACGGT GGACACGGGC TTCGCGCCCC ATCGCTGGCT GCGCGACCTG
CGGGCCTTCA TCAACCGCCG GTCGGGCGAT GCGGTGCTTC TGGGCGAGGT GAACCTCGAC
TACCCGGACG TGCGCCGCTT CTTCGGCGAC GAGGATGGCG ACGAGCTGCA CATGTGCCTC
GACTTCAACC TCAATCAGGC CATGGCGCTG GCGCTCGCCC GCGAGGATGC GGGGCCCATC
GTCCACGGGC TGCGCCACAT GCCCGAACTC GCGCCCGACG ATGGCTGGGC GCATTTCCTG
CGCAACCACG ACGAATGGTC GCTCGACAAG CTGACCGAGG CCGAGCGGCA GGAGGTCTTC
GCCTCCTTCG GGCCCGATCC CTCGATGCAG CTCTTCGGGC GCGGCCTGCG GCGGCGGATG
CCCACCATGC TGAAGGGCAA TCCCGACCGG CTGCGGATGG CCTATGCGCT GATGGCCTCG
ATGCCGGGCT CGCCCGTGAT CTTCTACGGC GAGGAGATCG GCATGGCCGA AAATCTCGAG
ATCCCCGGAC GGCTCGCCGT GCGCGCGCCG ATGCAGTGGG ATGCCGGCCC GCATGGCGGT
TTCTCGAACG CGAGCACCGA GGCCCTGCAC CGGCCCATGG TCTCGGATCC GCAGTGGGGA
CCCGGGAAGG TCAATGCCAT CGACCAGCAG GACCGGCCGG ACACGATGTT CCACTTCATG
GAGCATCTCC TCCGGCGGCG GCGGGAGTGC CCCGAGATCG CCTTCGGCGA GCATGCCGTG
CTGCCGTTTC CCGAGCCCGA GATCTTCGCC ATCCGGCACG ACTGGGAAAG CCGCACGCTC
ATCGCTCTCG CCAATCTCGG CGCAAAGCCG CAGAAGGTGA CGCTCACGCT GCCGAAGGCC
TCGGGGCTGG GCAGGCTGCG GCCCATCCTC GGCGAGGGAA AGGTCTCGCT GCGCAAGGAC
GAGCTGACGG TCGAGCTCGA GGGCTACGGG CTGCGCTGGG TGCGGTTCGA GAGCTGA
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| Protein sequence | MTDADLGRLR MDISRTSDVW WKNAVFYCLD VETFQDSNGD GIGDFAGLTR RLDHLDRLGV
SCIWLMPFYP SPNQDDGYDI TDYYSVDPRL GTLGDFVEFL RAAHDRGMRV IADLVVNHTS
REHPWFQASR ADPDSPYRDW YVWRDEKPEE DAASLVFPGE ENSSWTWDAK AGKYYLHRFY
SHQPDLNVEN RAVRDEIQRI VGFWLQLGLS GFRVDAVPFL LEQMSTVDTG FAPHRWLRDL
RAFINRRSGD AVLLGEVNLD YPDVRRFFGD EDGDELHMCL DFNLNQAMAL ALAREDAGPI
VHGLRHMPEL APDDGWAHFL RNHDEWSLDK LTEAERQEVF ASFGPDPSMQ LFGRGLRRRM
PTMLKGNPDR LRMAYALMAS MPGSPVIFYG EEIGMAENLE IPGRLAVRAP MQWDAGPHGG
FSNASTEALH RPMVSDPQWG PGKVNAIDQQ DRPDTMFHFM EHLLRRRREC PEIAFGEHAV
LPFPEPEIFA IRHDWESRTL IALANLGAKP QKVTLTLPKA SGLGRLRPIL GEGKVSLRKD
ELTVELEGYG LRWVRFES
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