Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_2586 |
Symbol | |
ID | 4897194 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009049 |
Strand | - |
Start bp | 2723021 |
End bp | 2723926 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640113185 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001044460 |
Protein GI | 126463346 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0277024 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATCGAC TGACGGAAAT GGAAGCCTTC GCCATGGTGG TGGATCAGGG CGGCTTCACC GATGCGGCCC GGAAGATGGG CATCTCCAAG TCCGCCGTCT CGAAACATGT CTCGGCGCTC GAGGCGCGGC TGGGGGCGCG GCTTCTCAAC CGCACCACGC GCCGGGTCTC GCCCACGGAG ATCGGGCTCG CCTATTACGA CCGGGCGCGG CGGGTGCTGA CCGACGCGGG CGAGGCCGAT GCGCTGGTGA CCTCGATGCA GACCGCGCCG TCGGGGCACC TGCGCCTCTC GGTCGCTGCG GATTTCGGCG TGGCCCTGCT GACGCCGATC CTCGCGGAAT TCCTGCTCGA CTATCCCGAC ATCACCGTGA CGATGGTGCT GAACAACCGC AGCGTGGAGC TGATCTCGGA AGGGTTCGAC ATGGCGATCC GCGTGGGCGA TCTCGAGGAT TCGAGCCTGC GCGCACGCAA GCTGACCGAG ACCACCCGGC GGATGATCGC GTCTCCGGGC TATCTCCAGC GGCACGGGCG GCCGATGAAG ATCGACGACC TGACGGATCA CAGGCTGCTC TATCACTCGA CGCAGGCGCA CGGAAACGTC TGGCGGCTCC TGTCGCCCTC GGGCGAGCCG CGGCAGGTGC GGGCGCCGGG CTTTCTGACC GTGAACGACG GCCATTCGCT GCTCAAGGCG GCGGTCTCGG GGCTGGGCAT CGCCCATCTG CCCGAGTTCC TCTTCGCGGA GGCCATGCGT GCGGGGCTGG TCGAGGAGGT GCTGCCGGAC CTGCCGGTCG AGACGCTGGG CATCCATGCC ATCTATCCCG CGGGCCGGTT CACCCAGCCC AAGGTGCGCG CCTTCATCGA CTTCCTCGTG CGCCGCTTTC TGGAAAAGGG GCCGATCGGG AATTGA
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Protein sequence | MDRLTEMEAF AMVVDQGGFT DAARKMGISK SAVSKHVSAL EARLGARLLN RTTRRVSPTE IGLAYYDRAR RVLTDAGEAD ALVTSMQTAP SGHLRLSVAA DFGVALLTPI LAEFLLDYPD ITVTMVLNNR SVELISEGFD MAIRVGDLED SSLRARKLTE TTRRMIASPG YLQRHGRPMK IDDLTDHRLL YHSTQAHGNV WRLLSPSGEP RQVRAPGFLT VNDGHSLLKA AVSGLGIAHL PEFLFAEAMR AGLVEEVLPD LPVETLGIHA IYPAGRFTQP KVRAFIDFLV RRFLEKGPIG N
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