Gene Rsph17029_2573 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_2573 
Symbol 
ID4897386 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009049 
Strand
Start bp2710575 
End bp2711327 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content72% 
IMG OID640113172 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_001044447 
Protein GI126463333 
COG category[R] General function prediction only 
COG ID[COG4221] Short-chain alcohol dehydrogenase of unknown specificity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.331162 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCAACA TGCAGGGCAA GGTCGTGGCA ATCACCGGGG CCAGCCGCGG GATCGGAGCG 
GCCGCGGTGC GCGTCTTCGC GGCGGCGGGC GCGCGCGTCG CGCTCCTCTC CCGCAGCGGG
GCCGAGATCG AGGCGCTGGC GGCCGAGGCG GGGCAGGGCG CCTTCGCCCT GACCTGCGAC
GTGGCCGACC GGGCCTCGGT GCAGACGGCG ATCGACCGGG TGGTCGAGAC GGCGGGCCGG
ATCGACGTGC TCATCAACAA TGCGGGCGTG ATCGAGCCCA TCGCGCGGCT GGCGGATGCC
GATCCCGACG CCTGGGACCG CGCCATCGAC GTCAACCTCA AGGGCGTCTT CCACGGGATG
CGGGCGGCGG TGCCGTACAT GCGCGCCAGG GGCGGCACCA TCATCACCGT GAGTTCCGGC
GCGGCGCAGA ATGCGCTCGA GGGCTGGAGC GCCTATTGCA GCTCGAAGGC GGGCGCGGCC
ATGCTGACCC GCTGCGCCCA TCTCGAGGAG GCGGTCCACC GCATCCGCAT CCTGGGCCTC
TCGCCCGGGA CGGTCGCGAC CGAGATGCAG GACAAGATCC GCGAGAGCGG CATCAACCCG
GTGAGCCGTC TCGATCCCTC GGTCCATATC CCGGCCGACT GGCCGGCGAA GGCGCTTCTG
TGGATGTGCG GTCCGGGCGC GGACAAGTGG CTCGGGCAGG AGATCTCGCT GCGCGACGAG
GCGATCCGGC GGGCGGTGGG GCTCGGCGCA TGA
 
Protein sequence
MGNMQGKVVA ITGASRGIGA AAVRVFAAAG ARVALLSRSG AEIEALAAEA GQGAFALTCD 
VADRASVQTA IDRVVETAGR IDVLINNAGV IEPIARLADA DPDAWDRAID VNLKGVFHGM
RAAVPYMRAR GGTIITVSSG AAQNALEGWS AYCSSKAGAA MLTRCAHLEE AVHRIRILGL
SPGTVATEMQ DKIRESGINP VSRLDPSVHI PADWPAKALL WMCGPGADKW LGQEISLRDE
AIRRAVGLGA