| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_2571 |
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| Symbol | |
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| ID | 4896362 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009049 |
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| Strand | + |
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| Start bp | 2708505 |
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| End bp | 2709830 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640113170 |
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| Product | TRAP dicarboxylate transporter, DctM subunit |
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| Protein accession | YP_001044445 |
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| Protein GI | 126463331 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.870036 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.517324 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCAG CCCTCATCTT CGGCGGTCTC ATCGCCCTCA TGCTGACCGG CATGCCGATC
TCGATCGCGC TCGGCCTGAC GGTTCTGACC TTCCTCTTCA CCATGACGGC CGTGCCGATC
GACACGGTGG CGCTGAAGCT CTTCACCGGC ATCGAGAAGT TCGAGATCAT GGCGATCCCG
TTCTTCATCC TCGCGGGGAA CTTCCTGACC CACGGCGGCG TGGCGCGGCG GATGATCGCC
TTCGCCACCT CGATGGTGGG CCACTGGCAC GGCGGCCTGG GCCTCGGCGG CGTCTTCGCC
TGCGCCCTCT TCGCCGCCGT CTCGGGCTCC TCGCCCGCGA CCGTGGTGGC CATCGGCTCG
GTCATCCTGC CCGCCATGGT GGCGCAGGGC TTCCCCACCC GCTTCGGCGC GGGCGTCATC
ACCACGAGCG GCGCGCTCGG CATCCTGATC CCGCCGTCCA TCGTGATGGT GATGTATTGC
GTGGCCACCT CGGGGATGAT GGTCGAGGGG CCGGACGGCA CCATCGTCGA TGCGGCCTCG
GTGGGCGAGA TGTTCATCGC GGGCGTGATC CCGGGGATCA TGCTGGCGGG CGCACTCGCG
CTCACCACCT GGTATCGGGC CTGGAAGAAC GACTATCCCC GCCTGCCGAA GGCCAGCTGG
GGCGAACGCT GGCAGGCCTT CCGCCGGGCG ATCTGGGGCC TCCTGCTCAT CGTGATCGTG
ATGGGCGGCA TCTACACCGG CACCTTCACC CCCACCGAAG CCGCCGCCAT GAGCGCCGTC
TATGCCTTCG TGATCGCGGT CTTCGTCTAC AAGGACATGG GTCTCAAGGA CGTGCCGCGG
GTGCTGCTCG CCTCGGCCAA CATGTCGGCG ATGCTGCTCT ACATCATCAC CAACGCGGTG
CTGTTCAGCT TCCTGCTCAC GCACGAGAAC ATCCCGCAGG CATTGGGCCA GTGGATGGTG
GATTCGGGCC TGACCTGGTG GATGTTCCTC ATCGCGGTGA ACATCATCCT GCTCGCGGCC
GGCAACTTCA TGGAGCCCTC CTCCATCGTG CTCATCATGG CGCCGATCCT GTTCCCGGTG
GCCGTGCGGC TCGGGATCGA CCCGGTGCAT TTCGGGATCA TGATCATCGT GAACATGGAG
GTCGGCATGT GCCACCCGCC CGTGGGGCTG AACCTCTATG TGGCCTCGGG CATCACCAAG
ATGGGCATCA CCGAACTCAC CATCGCGGTC TGGCCGTGGC TGCTGACGAT GCTGGCCTTC
CTCCTGCTCG TGACCTACGT CCCGCAGATC TCGCTCTTCC TGCCGCATCT GCTGGGCATG
CGCTGA
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| Protein sequence | MNAALIFGGL IALMLTGMPI SIALGLTVLT FLFTMTAVPI DTVALKLFTG IEKFEIMAIP
FFILAGNFLT HGGVARRMIA FATSMVGHWH GGLGLGGVFA CALFAAVSGS SPATVVAIGS
VILPAMVAQG FPTRFGAGVI TTSGALGILI PPSIVMVMYC VATSGMMVEG PDGTIVDAAS
VGEMFIAGVI PGIMLAGALA LTTWYRAWKN DYPRLPKASW GERWQAFRRA IWGLLLIVIV
MGGIYTGTFT PTEAAAMSAV YAFVIAVFVY KDMGLKDVPR VLLASANMSA MLLYIITNAV
LFSFLLTHEN IPQALGQWMV DSGLTWWMFL IAVNIILLAA GNFMEPSSIV LIMAPILFPV
AVRLGIDPVH FGIMIIVNME VGMCHPPVGL NLYVASGITK MGITELTIAV WPWLLTMLAF
LLLVTYVPQI SLFLPHLLGM R
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