| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_2570 |
|---|
| Symbol | |
|---|
| ID | 4896342 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17029 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009049 |
|---|
| Strand | + |
|---|
| Start bp | 2707820 |
|---|
| End bp | 2708503 |
|---|
| Gene Length | 684 bp |
|---|
| Protein Length | 227 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640113169 |
|---|
| Product | tripartite ATP-independent periplasmic transporter DctQ |
|---|
| Protein accession | YP_001044444 |
|---|
| Protein GI | 126463330 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3090] TRAP-type C4-dicarboxylate transport system, small permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.679405 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGCGCC TTCTCGACCG GCTGGAGGAA ACGCTCATCG CCTCGCTCAT CGCGGCGGCG
ACAGGGCTGA TCTTCGTCTC GGTCGTCCAA CGCTATTCGC TGGGCCTTCT GGCCGATGGC
GTGGCCTTCT TCCGTGGCCA CGACATGCCC GAGCTCTCGG CCATGATGCG CAGCGCCTAT
CTCGGCCTGC GCGAGTTCAA CCTCGTCTGG GCGCAGGAGC TCTGCATCAT CCTGTTCGTC
TGGATGGCGA AGTTCGGCGC GGCCTACGGG GTGCGGACCG GCATCCATGT GGGCATCGAC
GTGCTCATCA ACAAGCTCGA CGAGCGCAAG CGCGGCTTCT TCATCCTGCT GGGCCTCGGG
GCGGGCGCGC TCTTCACCGG CATCATCGCG ACGCTCGGCG GCAATTTCGT GTGGCACATG
GCCCAGACCA GCGCGATCTC CCCCGATCTC GAGCTGCCGA TGTGGCTCGT CTATCTGGCC
ATTCCGCTCG GCTCGGCGCT GATGTGTTTC CGCTTCCTGC AGGTGGCGGT GATCTTCGCG
CGCACGGGCG AGCTGCCCCA CCACGACCAC GGCCATGTCG AGGGCGTGGA CACAGAGGAC
GAGGGGATCG ACGTGCTCGG CAGCACCTTC CTCAAGTCGC CGCTGACGCC GCGCGACCTC
GTCGAGAAGC CGAAGGACGA ATGA
|
|---|
| Protein sequence | MMRLLDRLEE TLIASLIAAA TGLIFVSVVQ RYSLGLLADG VAFFRGHDMP ELSAMMRSAY
LGLREFNLVW AQELCIILFV WMAKFGAAYG VRTGIHVGID VLINKLDERK RGFFILLGLG
AGALFTGIIA TLGGNFVWHM AQTSAISPDL ELPMWLVYLA IPLGSALMCF RFLQVAVIFA
RTGELPHHDH GHVEGVDTED EGIDVLGSTF LKSPLTPRDL VEKPKDE
|
|---|
| |