| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_2569 |
|---|
| Symbol | |
|---|
| ID | 4895814 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17029 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009049 |
|---|
| Strand | + |
|---|
| Start bp | 2706730 |
|---|
| End bp | 2707734 |
|---|
| Gene Length | 1005 bp |
|---|
| Protein Length | 334 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640113168 |
|---|
| Product | TRAP dicarboxylate transporter, DctP subunit |
|---|
| Protein accession | YP_001044443 |
|---|
| Protein GI | 126463329 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
|---|
| TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family
[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.282286 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.691286 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGACCC GTCGCAGCCT CGCCGCTCTG GCAGGCGCCG CCGCGCTGGC GCTCGCCGCC
GCCGTGCCGG CTCTCGCCCA GCCGATCGTC ATCAAGTTCA GCCACGTCGT CGCCCCCGAC
ACGCCGAAGG GCAAGGGCGC CACGAAGTTC GAGGAACTGG CGGAGAAATA CACCGACGGC
GCGGTGGATG TCGAAGTCTA CCCCAACAGC CAGCTCTACA AGGACAAGGA AGAGCTCGAG
GCGCTGCAGC TCGGCGCGGT CCAGATGCTC GCCCCGTCGC TGGCCAAGTT CGGCCCGCTC
GGCGTGCAGG ATTTCGAGGT CTTCGACCTG CCCTACATCT TCAAGGGCTA TGACGCGCTG
CACACCGTGA CCAACGGCGA GGTGGGCAAG ATGCTGTTCT CGAAGCTCGA GGACAAGGGC
ATCAAGGGCC TCGCCTACTG GGACAACGGC TTCAAGATCA TGTCGGCCAA CAGCCCGATC
GCCACGCCCG ACGACTTCCT CGGGCTGAAG ATGCGCATCC AGTCCTCGAA GGTGCTCGAG
GCGCAGATGA ACGCGCTCGG CGCGGTGCCG CAGGTCATGG CCTTCTCCGA GGTCTATCAG
GCGCTGCAGA CCGGCGTCGT GGACGGCACC GAGAACCCGC CCTCGAACAT GTATACCCAG
AAGATGCACG AGGTGCAGAA GCACGCCACG GTCTCGAACC ACGGCTACCT CGGCTATGCG
GTGATCGTGA ACAAGCAGTT CTGGGACGGC CTGCCCGAAG AGGTGCGCGC CGGGCTCGAG
AAGGCGCTGA CCGAGGCCAC CGACTATGCC AACGGCATCG CCAAGGAAGA GAACGACAAG
GCGCTGCAGG CGATGAAGGA CGCGGGCACG ACCGAGTTCC ACGAGCTGAC CCCCGAAGAG
CTCGCGGCCT GGGAAGAGGT GCTCGCCCCC GTCCATGAGG AAATGGCCGG CCGCATCGGC
GCCGAGACCA TCGCCGCCGT GAAGGCCGCG ACCGGGACCA ACTGA
|
|---|
| Protein sequence | MLTRRSLAAL AGAAALALAA AVPALAQPIV IKFSHVVAPD TPKGKGATKF EELAEKYTDG
AVDVEVYPNS QLYKDKEELE ALQLGAVQML APSLAKFGPL GVQDFEVFDL PYIFKGYDAL
HTVTNGEVGK MLFSKLEDKG IKGLAYWDNG FKIMSANSPI ATPDDFLGLK MRIQSSKVLE
AQMNALGAVP QVMAFSEVYQ ALQTGVVDGT ENPPSNMYTQ KMHEVQKHAT VSNHGYLGYA
VIVNKQFWDG LPEEVRAGLE KALTEATDYA NGIAKEENDK ALQAMKDAGT TEFHELTPEE
LAAWEEVLAP VHEEMAGRIG AETIAAVKAA TGTN
|
|---|
| |