Gene Rsph17029_2563 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_2563 
Symbol 
ID4896155 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009049 
Strand
Start bp2700550 
End bp2701443 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content69% 
IMG OID640113162 
Productperiplasmic solute binding protein 
Protein accessionYP_001044437 
Protein GI126463323 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0803] ABC-type metal ion transport system, periplasmic component/surface adhesin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.581296 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.97543 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATGC GACGGATCGG ATGGGCCGCC TCGATGGCGA TGCTCCTCAT GGCGGGGCCG 
GCGCTCGCCG ACCGGCTGAA GGTCGCCACG ACCTTCACGG TCATCGCCGA CATGGCGCAG
AACGTGGCGG GCGATGCGGC CGAGGTGGTG TCGATCACCC GACCCGGCGC CGAGATCCAC
GGCTACGAGC CCACGCCCCG CGACATCGTG CGCGCCTGGG ACGCGGACCT GATCCTCTGG
AACGGGCTCA ATCTCGAGCT CTGGTTCGAG CAGTTCCTCT CGAACCTGAA GGATGTGCCG
TCGGTGACGG TGAGCGACGG GATCGAGCCG CTGGCCGTGG CGGGCGGCGA ATATCGCGGC
AGGCCCAATC CGCACGCCTG GATGGGCCTC GACAACGCCA TGATCTACAT CGACAACATC
GCCCACGCGC TGGCCGAGGC CGATCCGGCC CATGCCGAGA CCTATCGGGC CAATGCGGCA
GGCTATAAGG AGCGGCTCCG GGCGACCATC GGGCCCCTGC GCGACCGGAT CGCAGCCCTG
CCCGAGGAGC GGCGCTGGCT CGTGACCTGC GAGGGCGCCT TTTCCTATCT CGCCCGCGAC
TTCGGGCTGA AGGAGCTCTA TCTCTGGCCG ATGAACACCG ATCAGGTCGG CACGCCGCAG
CAGGTGCGCA CGGTGATCGA CGGGGTGAAG GCCCACGCGA TCCCGGCGGT CTTCTGTGAG
AGCACGGTGA ACAACGCCCC CGCCCGGCAG GTCGCGCGCG AGACGGGGGC GGCCTACGGC
GGCATGCTCT ATGTGGACAG CCTCAGCCCG CACGACGGAC CGGTGCCGAC CTATCTCGAC
CTCCTGCGGG TGACGGCCGA GACCATCGCG AACGGGCTGG AGGGCACGAG ATGA
 
Protein sequence
MNMRRIGWAA SMAMLLMAGP ALADRLKVAT TFTVIADMAQ NVAGDAAEVV SITRPGAEIH 
GYEPTPRDIV RAWDADLILW NGLNLELWFE QFLSNLKDVP SVTVSDGIEP LAVAGGEYRG
RPNPHAWMGL DNAMIYIDNI AHALAEADPA HAETYRANAA GYKERLRATI GPLRDRIAAL
PEERRWLVTC EGAFSYLARD FGLKELYLWP MNTDQVGTPQ QVRTVIDGVK AHAIPAVFCE
STVNNAPARQ VARETGAAYG GMLYVDSLSP HDGPVPTYLD LLRVTAETIA NGLEGTR