Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_2563 |
Symbol | |
ID | 4896155 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009049 |
Strand | + |
Start bp | 2700550 |
End bp | 2701443 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640113162 |
Product | periplasmic solute binding protein |
Protein accession | YP_001044437 |
Protein GI | 126463323 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0803] ABC-type metal ion transport system, periplasmic component/surface adhesin |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.581296 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.97543 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACATGC GACGGATCGG ATGGGCCGCC TCGATGGCGA TGCTCCTCAT GGCGGGGCCG GCGCTCGCCG ACCGGCTGAA GGTCGCCACG ACCTTCACGG TCATCGCCGA CATGGCGCAG AACGTGGCGG GCGATGCGGC CGAGGTGGTG TCGATCACCC GACCCGGCGC CGAGATCCAC GGCTACGAGC CCACGCCCCG CGACATCGTG CGCGCCTGGG ACGCGGACCT GATCCTCTGG AACGGGCTCA ATCTCGAGCT CTGGTTCGAG CAGTTCCTCT CGAACCTGAA GGATGTGCCG TCGGTGACGG TGAGCGACGG GATCGAGCCG CTGGCCGTGG CGGGCGGCGA ATATCGCGGC AGGCCCAATC CGCACGCCTG GATGGGCCTC GACAACGCCA TGATCTACAT CGACAACATC GCCCACGCGC TGGCCGAGGC CGATCCGGCC CATGCCGAGA CCTATCGGGC CAATGCGGCA GGCTATAAGG AGCGGCTCCG GGCGACCATC GGGCCCCTGC GCGACCGGAT CGCAGCCCTG CCCGAGGAGC GGCGCTGGCT CGTGACCTGC GAGGGCGCCT TTTCCTATCT CGCCCGCGAC TTCGGGCTGA AGGAGCTCTA TCTCTGGCCG ATGAACACCG ATCAGGTCGG CACGCCGCAG CAGGTGCGCA CGGTGATCGA CGGGGTGAAG GCCCACGCGA TCCCGGCGGT CTTCTGTGAG AGCACGGTGA ACAACGCCCC CGCCCGGCAG GTCGCGCGCG AGACGGGGGC GGCCTACGGC GGCATGCTCT ATGTGGACAG CCTCAGCCCG CACGACGGAC CGGTGCCGAC CTATCTCGAC CTCCTGCGGG TGACGGCCGA GACCATCGCG AACGGGCTGG AGGGCACGAG ATGA
|
Protein sequence | MNMRRIGWAA SMAMLLMAGP ALADRLKVAT TFTVIADMAQ NVAGDAAEVV SITRPGAEIH GYEPTPRDIV RAWDADLILW NGLNLELWFE QFLSNLKDVP SVTVSDGIEP LAVAGGEYRG RPNPHAWMGL DNAMIYIDNI AHALAEADPA HAETYRANAA GYKERLRATI GPLRDRIAAL PEERRWLVTC EGAFSYLARD FGLKELYLWP MNTDQVGTPQ QVRTVIDGVK AHAIPAVFCE STVNNAPARQ VARETGAAYG GMLYVDSLSP HDGPVPTYLD LLRVTAETIA NGLEGTR
|
| |