Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_2561 |
Symbol | |
ID | 4897397 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009049 |
Strand | + |
Start bp | 2698671 |
End bp | 2699315 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640113160 |
Product | HAD family hydrolase |
Protein accession | YP_001044435 |
Protein GI | 126463321 |
COG category | [R] General function prediction only |
COG ID | [COG0637] Predicted phosphatase/phosphohexomutase |
TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.467395 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.978444 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGAGG CGGTGATCTT CGACTGCGAC GGCGTGCTGG TGGACAGCGA ACCCACGGCC TTCGCGCTTC TGGGCGAGGA TCTCGCCCGC CACGGCCTTG CGCTCGATCA TGCGACGCTC GAGGCGCATT TCCTCGGCGG CACCATTCCC GGCGCGGCCG TGACGGCCCG CCGTCTGGGG GCAGACCTGC CCGCGGACTG GGTGGAGGAT TTCTACGAGC GGCTCTATGC GCGGCTGGCC GAAGGCACGC CGCTCATCCC CCATGTCGAG GAGGTGGTGG CCGCGCTCGA TCAGGCGGGC ATCCCCTATG CGGTGGGCTC GAACGGGTCC GACCGCAAGA TGCAGGTGAC GCTCGGCCAG CATCCGGCCC TGATGGCGCG GCTCGACGGG CGGCTGTTCT CGGGCCAGTC GATGGATGCG CCGAAGCCCG CGCCCGATCT CTATCTCCAT GCCGCCCGCG CGCTGGGGGT GGAGCCCGAC CGCTGCGCGG TGATCGAGGA CAGCCCGACC GGCGCCCGCG CCGCCCGCGC CGCCGGCATG ACCTGCTTCG GCTATGTGCC CGACGGCAGT CCGGAGGCGC TCGAGGCCGA GGGCGCGCGG CCCTTCTCGG ACATGCGCGA ACTGCCTGCC CTCCTCGGTC TCTAG
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Protein sequence | MIEAVIFDCD GVLVDSEPTA FALLGEDLAR HGLALDHATL EAHFLGGTIP GAAVTARRLG ADLPADWVED FYERLYARLA EGTPLIPHVE EVVAALDQAG IPYAVGSNGS DRKMQVTLGQ HPALMARLDG RLFSGQSMDA PKPAPDLYLH AARALGVEPD RCAVIEDSPT GARAARAAGM TCFGYVPDGS PEALEAEGAR PFSDMRELPA LLGL
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