| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_2551 |
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| Symbol | |
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| ID | 4895822 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009049 |
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| Strand | + |
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| Start bp | 2689575 |
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| End bp | 2691311 |
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| Gene Length | 1737 bp |
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| Protein Length | 578 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640113150 |
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| Product | type I secretion system ATPase |
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| Protein accession | YP_001044425 |
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| Protein GI | 126463311 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4618] ABC-type protease/lipase transport system, ATPase and permease components |
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| TIGRFAM ID | [TIGR01842] type I secretion system ABC transporter, PrtD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.961125 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCGAA GCGACAATCG CAAGGGACTG GAGGAGCTGC GCGCCGTCCG CCGCAGCTCC
ATGGGCGCGC TGACGTCCGT GTTCCTCTTC AGCATCTTCG TCAATCTGCT GATGCTGACG
GGCCCGCTCT ACATGCTGCA GGTCTACGAC CGGGTGCTCG GCTCGCGCTC CGAGGAGACG
CTGCTCGCAC TGTCCCTGCT CGTGACCTTC CTGTTCGTCG CCATGGGCGT GCTCGACCAT
GCGCGGGCGC GCGTCATGGC GCGCGTGGGC GCAGGCTTTC AGGAGAAGCT CGACCGCCGC
GTCTTCGAGG CCGCGGTGCG GCGGCTCTCG CTCGCGCCCG GCGATCCGTC GGCCGTCGCG
GCGCAGCGCG ATCTCGAATC GGTGCAGCGG CTCTGGGCCT CGCCGGTGCT GATCGCGCTC
TTCGACATTC CCTGGACCCC GTTCTTCCTC GCGGCCATCT TCGTCTTCCA CCCCTACATG
GGCTGGCTCG CCATCGGGGG CGGCGTCGTC CTCGTGATCG TGACGATCCT GAACCAGCGC
CTGTCCGAGG GGCCGATGCA GAAGGCCAAC ATCGTGGCGC TGCAGGCCGA CCGGTTCGCC
GAGAATCTCA AGTCGGAATC CGAGGTGGTG CAGGCGCTCG GCATGGCGGG CAACGGCTTC
GACCGCTGGC ACAAGGCGCG TGCCGCCGCG CTCGACGCGA ACATGTCGGC AGCCGACCTC
ACGGGGGCCT TCGGCACCCT GACCAAGACG CTGCGCCTCT TCCTGCAGTC CGCGATGCTG
GGACTCGGCG CCTGGCTCGT CCTGCAGCAG GAGCTGAGCG CGGGCGCCAT GATCGCGGGC
TCGATCCTGA TGGGCCGGGC GCTCGCCCCG ATCGAGAGCG CCATCGGCCA GTGGGCGCTG
GTGCAGCGCG CCTCCGAGGG CTGGCGACGG CTGGGAGAGC TCCTGACCCG CCAGCCGGTC
GAGCCGCCGC GCATCGCCCT GCCCCGCCCG CGGGCGCTGA TCGAGGCGCA GAACCTCTCC
GTGGTGCCGC CGGGCGAGGC GGTCGCGGTG CTGCGCGGCG TGAACTTCCG GCTGGATCCG
GGTCAGGCGC TCGGGGTCAT CGGCCCCTCG GGGTCGGGCA AGTCCACGCT GGCGCGGGCC
CTGATCGGGG TCTGGCGTCC GGCCGCGGGC AAGGTCCGGC TCGATGGCGC CGCCCTCGAC
CAGTATGACC CGGACGTGCT GGGCGGCTAT ATCGGCTACC TGCCCCAGCG CGTGACGCTC
TTCGAGGGCA CCATCGCCGA GAACATCGCG CGCCTGCGGG GCGCGCCCGA CGGCGACGCC
GTGGTGGCCG CCGCGCGCAA GGCCGCCGCG CACGACATGA TCGTGGCGCT TCCCTCGGGC
TACGACACCC GCGTCTCGGC CCTGGGCGGC CGGCTGTCCG GCGGGCAGAT CCAGCGCATC
GGGCTCGCGC GCGCCATGTA CGGCAACCCC GTGTTCCTCG TCCTCGACGA GCCGAACTCG
AACCTCGACA ACGAAGGCTC GCTTGCGCTG AACGCGGCGA TCCGCTCGAT GAAGCAGGCG
GGAGGGTCGG TGTTCATCAT GGCCCACCGC CCCGCCGCAA TTCAGGAGTG CGACCTCCTC
ATGGTGATGG AGAACGGAAT GCGCGCCGCC TTCGGCCAGC GCGACGCCGT GCTGCGCGAC
ATGGTGAAGA ACCATACCGA GATCGTGCGA AACGCAGGCC CCGGAGGCGT GACATGA
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| Protein sequence | MTRSDNRKGL EELRAVRRSS MGALTSVFLF SIFVNLLMLT GPLYMLQVYD RVLGSRSEET
LLALSLLVTF LFVAMGVLDH ARARVMARVG AGFQEKLDRR VFEAAVRRLS LAPGDPSAVA
AQRDLESVQR LWASPVLIAL FDIPWTPFFL AAIFVFHPYM GWLAIGGGVV LVIVTILNQR
LSEGPMQKAN IVALQADRFA ENLKSESEVV QALGMAGNGF DRWHKARAAA LDANMSAADL
TGAFGTLTKT LRLFLQSAML GLGAWLVLQQ ELSAGAMIAG SILMGRALAP IESAIGQWAL
VQRASEGWRR LGELLTRQPV EPPRIALPRP RALIEAQNLS VVPPGEAVAV LRGVNFRLDP
GQALGVIGPS GSGKSTLARA LIGVWRPAAG KVRLDGAALD QYDPDVLGGY IGYLPQRVTL
FEGTIAENIA RLRGAPDGDA VVAAARKAAA HDMIVALPSG YDTRVSALGG RLSGGQIQRI
GLARAMYGNP VFLVLDEPNS NLDNEGSLAL NAAIRSMKQA GGSVFIMAHR PAAIQECDLL
MVMENGMRAA FGQRDAVLRD MVKNHTEIVR NAGPGGVT
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