| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_2550 |
|---|
| Symbol | |
|---|
| ID | 4897415 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17029 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009049 |
|---|
| Strand | - |
|---|
| Start bp | 2688577 |
|---|
| End bp | 2689365 |
|---|
| Gene Length | 789 bp |
|---|
| Protein Length | 262 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640113149 |
|---|
| Product | VacJ family lipoprotein |
|---|
| Protein accession | YP_001044424 |
|---|
| Protein GI | 126463310 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2853] Surface lipoprotein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.51859 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGAACAAC GAACTGCCAT ACTCCGTGGA TGCCGAATCG CAGCCCACGG CGCCCTCTTT
GCCCTTCTCG GCGCCTTCGT ATCGGCCTGT GCGGGCTCGG CCAACCCCAC TCAGGCGGTC
AACGACCCGG ATGAGGCGGA CAACCGCCAG ATCCACGAGT TCAACAAGTC GGTCGACAAG
GCCGTGCTGC GCCCGGCCTC GCGCGCCTAT GCGGTGCTGC CCGACCCGGT CGAGCGCGGC
ATCAACAACT TCGCCGACAA CCTCGACCTG CCGGGCGAGA CGCTGAACAG CCTGCTGCAG
GGGCGGCCGG GCGCCGCCGT CGAGAATGCG GCCCGCTTCG TCGTCAACAC GACGATCGGG
ATCGGCGGCC TGTTCGACCC GGCGCACGCC ATGGGGATCG AGGGACGCAA CACGGACTTC
GGCGAGACGC TCTATGTCTG GGGCGCGAAC GAGGGTGTCT ATGGCGAGGT GCCGTTCCTC
GGGCCGCGCA CCGAGCGCGA CCTCGTGGGC GATGTGGTGG ACGTGGCGCT GAACCCGCTG
CGGCTCATCG TGCCCTCGGG CGTGCGGACG GCGGGCAGGG CGGCCGAGGT CGGCTCAATA
CTTGGTGATC GGGCCCGCTA TTCCGAAACG ATCGACTCGG TTCTATATGA AAGCGCCGAT
AGCTACTCGC AGACCCGGCT CCTCTATCTT CAGAACCGGC GTTTCGAGCT CGGCCAGACC
GGCGGGGCGG ACGATGCCTA CATCGACCCC TACGCCATCG ATCCATATGA GGAATTCGAT
GCCCAATGA
|
|---|
| Protein sequence | MEQRTAILRG CRIAAHGALF ALLGAFVSAC AGSANPTQAV NDPDEADNRQ IHEFNKSVDK
AVLRPASRAY AVLPDPVERG INNFADNLDL PGETLNSLLQ GRPGAAVENA ARFVVNTTIG
IGGLFDPAHA MGIEGRNTDF GETLYVWGAN EGVYGEVPFL GPRTERDLVG DVVDVALNPL
RLIVPSGVRT AGRAAEVGSI LGDRARYSET IDSVLYESAD SYSQTRLLYL QNRRFELGQT
GGADDAYIDP YAIDPYEEFD AQ
|
|---|
| |