Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_2548 |
Symbol | |
ID | 4895721 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009049 |
Strand | + |
Start bp | 2685421 |
End bp | 2687787 |
Gene Length | 2367 bp |
Protein Length | 788 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640113147 |
Product | 1A family penicillin-binding protein |
Protein accession | YP_001044422 |
Protein GI | 126463308 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.340929 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGGAGAG GAATTGAAGA CGCGCCCGCT CCACATTCGC GGCCCCTGCA GGTAGAGTCG CGGCAAAGTC CACAAGAGAC AAAAGGCGGG CAACGAGGCA TGAGCGGGTC GAACGGGCGG CGTCCACCGC TGATCGCGGA CAGGCGGTAC GGGCCGTCCG CCGCGAAGAA GACGGCATCG AACGGAGGCG GCGGCCGGGG CTCCAAGCCT CCGCCGAAAG CCGCGCCGAA ACGGCGGACG AAGAAGCGCG ATCCGCTTTC GGCGGCGGTG GCGTGGGTCT TCGGGCTGAT CTGGGGAATC GTGATGTTCT TCTGGCGCAT CCTCTGGGGC GTGGGCTGGC GCATCCTCGC GGCCGTGGCC CTCGTCGTGG GCCTGTCCTC CTATTATTTC TATTCGCAGC TGCCCGAGGT GGCCCAGCTC GTCGACGGAC GCGCCCGCGG CTCGGTCACG ATGCTCGACC GCGAGGGCAA GGTCTTCGCC TGGCGCGGCG AGACCTACGG CGGCATGGTC ACCTCGGACA AGGTCTCGAA ATACCTGCGC GAGGCGGTCG TCGCCACCGA AGACCGGCGC TTCTACCGCC ATTTCGGCGT GAGCCCCCGC GGCATCGCTT CGGCCGTGCG CATCAACCTG AGCGAGGGGC GCGGGCCGCT GGAGGGCAAC GGCGGCTCGA CCATCACGCA GCAGGTGGCC AAGCTCCTCT GCCTCGGCGT GCAATACGAT CCGAAGGAAT GGAAGAGCGA GGCCGACTAC GAGGCCGACT GCCGCAAGGG CGGGATCTGG CGGAAGGTGA AGGAAGTGCC CTTCGCCCTC GCGATGGAGG CGAAATATAC CAAGGCCGAG ATCCTGACGA TCTACTTCAA CCGCGCCTAT CTCGGCGCAG GCGCACGCGG CTTCGAGGCT GCGGCGCAGC GCTACTTCGG CAAGTCGGCG AGCGAGGTGA ATGCCTCCGA AGCCGCGATG CTGGCGGGCC TGCTGAAGGC GCCCTCCTAC TACGCGCCCA CGGCCAACCT CGAGCGCGCG CGCGACCGGG CGAATGTCAT CATCGGCCTC ATGGAGGAGC AGGGCTACCT GACCCGCGCC GAAGCCGATC AGGCCCGCGC CCATCCGGCC CAGCTCTCCG AGGCGGCGCA GAGCCGCTCC GGCGGCTTCT TCGCCGACTG GGTGATGGAG TCGGGGCCGG CCTTCCTGAC CCGCGACACG ACCGAGGATG TCATCATCCG CACGACGCTC GACCAGCGGC TGCAGCGCGC GGCGGAAGGC GCGCTCGACG ACGTGTTCAA GACCAAGGTG AGCGAGGGCT CGAAGGCGCA GGCGGCGGTC GTGGTCATGT CGGCCGACGG CGCGGTGCGC GCCATGGTCG GCGGGCGCAA GGTTCAGGCG GCGGGCTCGT TCAACCGCGC GACCCAGGCG CTGCGGCAGA CGGGCTCGGC CTTCAAGCCC TTCATCTATG CCGCCGCGAT GGATCTGGGC TACAGCCCCG CCGATTTCGT CGACGACAGC CCGCTCACGG TGATGGTGAA GGGCTCGGGC CCCTGGTCGC CCTCGAACTA CGACCGGAAG TTCCGCGGGA TCGTGACGCT GACCAGCGCG CTCAAGCAGT CGCTCAACAT CCCCGCCGTC CGCATCACCG AGGCCGTGGG CCGCGAGAAG GTGCGTCAGG TGGCCTCGGA ATTCGGCATC CAGAGCGATC TCGCCGCCGG GCCCGCGCTT GCGCTCGGCG TGTCGGAGGC CACGCTCCTC GAGATGACCG GCGCCTATGC GGGCATCCTG AACGGCGGCT CGGCGGTGAA GCCCTACGGG CTCGTCGAAC TCCGCCTGCA GGGCGAGGAT ACGCCGCTGA TCGGTCAGGA GGGCGGCATC GGCGAGCGGG TAATCTCCGA GCAGGCGGCC CAGCTTCTGA CCTACATGAT GACCCAGGTG ATCGAGAGCG GCACTGGCGC CCGGGCCCGC CTGCCGGGCT GGGAGGCCGC GGGCAAGACC GGCACCACCC AGGCGGCCCG CGATGCGTGG TTCGTGGGCT TCACCGCCGA TTATGTGGCA GGCGTCTGGA TGGGCTACGA CGACAACACG CCGCTGAAGG GCGTGACGGG CGGCGGGCTT CCCGCCGACA TCTGGCGCGA GGTGATGGTG CGGGTCCACG AGGGGCTTCA ACCCCAGCCG CTGAAGAAGA TCGTGCCCGA GCCGCGCATG CCGCCGCAGA CGACGGCCGA CGTGCGCACC GATCCCGTGC CGCAGGACAC GGGCGACTGG CAGGCGCAGC GCCCGAACGA TACCGGCGAC TGGCAGGCGG CCCCCCGTCC GCCGAGCGCG GGCGAGCAGA TCGTGCGCGA CGTGCTCGGC ATCTTCGGCG GCGGCGGGCG GAACTGA
|
Protein sequence | MRRGIEDAPA PHSRPLQVES RQSPQETKGG QRGMSGSNGR RPPLIADRRY GPSAAKKTAS NGGGGRGSKP PPKAAPKRRT KKRDPLSAAV AWVFGLIWGI VMFFWRILWG VGWRILAAVA LVVGLSSYYF YSQLPEVAQL VDGRARGSVT MLDREGKVFA WRGETYGGMV TSDKVSKYLR EAVVATEDRR FYRHFGVSPR GIASAVRINL SEGRGPLEGN GGSTITQQVA KLLCLGVQYD PKEWKSEADY EADCRKGGIW RKVKEVPFAL AMEAKYTKAE ILTIYFNRAY LGAGARGFEA AAQRYFGKSA SEVNASEAAM LAGLLKAPSY YAPTANLERA RDRANVIIGL MEEQGYLTRA EADQARAHPA QLSEAAQSRS GGFFADWVME SGPAFLTRDT TEDVIIRTTL DQRLQRAAEG ALDDVFKTKV SEGSKAQAAV VVMSADGAVR AMVGGRKVQA AGSFNRATQA LRQTGSAFKP FIYAAAMDLG YSPADFVDDS PLTVMVKGSG PWSPSNYDRK FRGIVTLTSA LKQSLNIPAV RITEAVGREK VRQVASEFGI QSDLAAGPAL ALGVSEATLL EMTGAYAGIL NGGSAVKPYG LVELRLQGED TPLIGQEGGI GERVISEQAA QLLTYMMTQV IESGTGARAR LPGWEAAGKT GTTQAARDAW FVGFTADYVA GVWMGYDDNT PLKGVTGGGL PADIWREVMV RVHEGLQPQP LKKIVPEPRM PPQTTADVRT DPVPQDTGDW QAQRPNDTGD WQAAPRPPSA GEQIVRDVLG IFGGGGRN
|
| |