| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_2533 |
|---|
| Symbol | |
|---|
| ID | 4895394 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17029 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009049 |
|---|
| Strand | + |
|---|
| Start bp | 2668193 |
|---|
| End bp | 2668684 |
|---|
| Gene Length | 492 bp |
|---|
| Protein Length | 163 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 640113132 |
|---|
| Product | peptide deformylase |
|---|
| Protein accession | YP_001044407 |
|---|
| Protein GI | 126463293 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
|---|
| TIGRFAM ID | [TIGR00079] peptide deformylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.123304 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.693808 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGATCC TGCCGATCCT GCGCTGGCCC GACCCGCGTC TGTCGCAGGC CTGCGCGCCG
GCCGAGCCCG GCCCGGCGCT CGAGGCGCTC GCCTCCGACA TGCTGGCCAC GATGTATCAC
GCCGAAGGCC GTGGCCTCGC CGCGCCGCAG GTGGGCCACA TGGTCCGGCT CTTCGTGATG
GACACGCTCT GGAAGGAGGC CCCGGCCGCG CCGCAGGTCT TCGTCAATCC CCAGATCCTC
TGGATGGCCG AGGCGCGGGT GGAAGGCCGC GAGGGCTGCC TCTCGATCCC CGGCGCCCGC
CCCCTCGTGG CCCGCGCGCC CGAGATCCGG CTGCGCTGGA CAAGCCTCTT CGGCGCCGAG
CAGGAAGCGC TCCTCACCGG CATCGACGCC ATCTGCGCCC AGCACGAGAT CGACCATCTG
GACGGGATCG TGACCCTCGA CCGCCTCTCG CCCGCCGCGC GCGACGAGGC CCTGCGGGAG
ATGGAGACAT GA
|
|---|
| Protein sequence | MAILPILRWP DPRLSQACAP AEPGPALEAL ASDMLATMYH AEGRGLAAPQ VGHMVRLFVM
DTLWKEAPAA PQVFVNPQIL WMAEARVEGR EGCLSIPGAR PLVARAPEIR LRWTSLFGAE
QEALLTGIDA ICAQHEIDHL DGIVTLDRLS PAARDEALRE MET
|
|---|
| |