Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_2523 |
Symbol | |
ID | 4896667 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009049 |
Strand | - |
Start bp | 2660984 |
End bp | 2662411 |
Gene Length | 1428 bp |
Protein Length | 475 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640113122 |
Product | isopropylmalate isomerase large subunit |
Protein accession | YP_001044397 |
Protein GI | 126463283 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0065] 3-isopropylmalate dehydratase large subunit |
TIGRFAM ID | [TIGR00170] 3-isopropylmalate dehydratase, large subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.520601 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGCTC CGAGAACGCT CTATGACAAG ATCTGGGACG ACCATGTCGT CCACCAGTCC GAAGACGGCA CCTGCCTGCT CTATATCGAC CGCCATCTCG TCCACGAGGT GACGAGCCCG CAGGCCTTCG AAGGCCTGCG CATGACGGGC CGCAAGGTGC GCGCCCCCGA GAAGACCATC GCCGTGCCGG ACCACAACGT CCCCACGACG GAAGGCCGCG ACACGAAGAT CGACAACGAG GAGTCGCGCA TCCAGGTCGA GGCGCTCGAC AGGAATGCCC GCGACTTCGG GATCAACTAC TATCCCGTGT CGGACATCCG GCAGGGGATC GTCCATATCG TCGGGCCCGA GCAGGGCTGG ACGCTGCCGG GCATGACGGT GGTCTGCGGC GACAGCCACA CGGCCACCCA CGGCGCCTTC GGCGCGCTGG CCCACGGCAT CGGCACCTCC GAGGTCGAGC ATGTGCTGGC CACGCAGACG CTGATCCAGA AGAAATCGAA GAACATGAAG GTGGAGATCA CCGGGAGCCT GCGCCCCGGT GTCACCGCCA AGGACATCAC GCTGTCGGTC ATCGGTCTCA CCGGGACGGC GGGCGGCACC GGCTATGTCA TCGAATATTG CGGGCAGGCG ATCCGCGAAC TGTCGATGGA AGGCCGGATG ACCGTCTGCA ACATGGCGAT CGAGGGCGGC GCGCGCGCGG GCCTGATCGC GCCGGACGAG AAGACCTTCG CCTATGTGAT GGGTCGTCCG CATGCGCCGA AGGGCGCAGC CTGGGAGGCG GCGCTCGCCT ACTGGAAGAC GCTCTTCACC GACAAGGGCG CGCAGTTCGA CAAGGTCGTG ACGATCCGCG GCGAGGACAT CGCCCCGGTC GTGACCTGGG GCACCTCGCC CGAGGATGTG CTGCCGATCA CCGCGACCGT CCCCGCCCCG GAGGACTTCA CCGGCGGCAA GGTCGAGGCC GCCCGCCGCA GCCTCGAATA CATGGGCCTG ACCCCGGGCC AGAAGCTGAC CGACATCAAG ATCGACACGG TCTTCATCGG CTCCTGCACC AACGGCCGGA TCGAGGATCT GCGGGCCGCG GCCGAGATCC TGAAGGGCAA GAAGGTGGCG CCGGGAATGC GGGCCATGGT CGTGCCGGGC TCGGGCCTCG TGCGCGCGCA GGCCGAGGAA GAGGGGCTGG CGCAGATCTT CATCGACGCG GGCTTCGAAT GGCGCCTCGC GGGCTGCTCG ATGTGCCTCG CGATGAACCC CGACCAGCTC TCGCCGGGGG AACGCTGCGC CTCGACCTCG AACCGGAACT TCGAGGGCCG TCAGGGCCGC AACGGCCGCA CCCATCTCGT CAGCCCCGGA ATGGCCGCCG CTGCGGCGAT CACCGGTCAC CTGACCGACG TGCGCGACCT GATGATGGCG CCGGCCGAGC CGGCGTGA
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Protein sequence | MTAPRTLYDK IWDDHVVHQS EDGTCLLYID RHLVHEVTSP QAFEGLRMTG RKVRAPEKTI AVPDHNVPTT EGRDTKIDNE ESRIQVEALD RNARDFGINY YPVSDIRQGI VHIVGPEQGW TLPGMTVVCG DSHTATHGAF GALAHGIGTS EVEHVLATQT LIQKKSKNMK VEITGSLRPG VTAKDITLSV IGLTGTAGGT GYVIEYCGQA IRELSMEGRM TVCNMAIEGG ARAGLIAPDE KTFAYVMGRP HAPKGAAWEA ALAYWKTLFT DKGAQFDKVV TIRGEDIAPV VTWGTSPEDV LPITATVPAP EDFTGGKVEA ARRSLEYMGL TPGQKLTDIK IDTVFIGSCT NGRIEDLRAA AEILKGKKVA PGMRAMVVPG SGLVRAQAEE EGLAQIFIDA GFEWRLAGCS MCLAMNPDQL SPGERCASTS NRNFEGRQGR NGRTHLVSPG MAAAAAITGH LTDVRDLMMA PAEPA
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