Gene Rsph17029_2481 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_2481 
SymbolglyA 
ID4895199 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009049 
Strand
Start bp2615161 
End bp2616456 
Gene Length1296 bp 
Protein Length431 aa 
Translation table11 
GC content68% 
IMG OID640113079 
Productserine hydroxymethyltransferase 
Protein accessionYP_001044355 
Protein GI126463241 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0112] Glycine/serine hydroxymethyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.938329 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.172432 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCCC CGCACCGCGA CGACGGCTTC TTTACCGAAA GCCTCTCTTC CCGCGATCCC 
GAGCTTTTCG CCTCGATCAC CGGCGAACTC GGCCGCCAGC GCGACGAGAT CGAGCTGATC
GCCTCGGAGA ATATCGTGAG CCGCGCCGTG ATGGAGGCGC AGGGCTCGGT CATGACGAAC
AAGTACGCCG AAGGCTATGC GGGCAAGCGC TATTACGGCG GCTGCGACTA TGTCGACGTG
GCCGAGACGC TGGCCATCGA GCGGGCGAAG CAGCTGTTCG GCTGCGCCTA TGTGAACGTG
CAGCCGAACT CGGGCAGCCA GGCCAACCAG GGCGTGTTCC AGGCGCTCAT CAAGCCGGGC
GACACCATTC TGGGCATGGA GCTCGCCTCG GGCGGCCACC TCACCCACGG GGCCGCGCCG
AACCAGTCCG GCAAGTGGTT CAACGCGGTG CAGTATGGCG TGCGCCAGCA GGACCAGCTG
ATCGACTACG ATCAGGTGGC GGCGCTCGCG CGCGAGCACA AGCCCAAGCT CATCATCGCG
GGCGGCTCGG CCATCCCGCG CCAGATCGAC TTCGCCCGCT TCCGCGCCAT CGCGGATGAG
GTGGGCGCGC TCCTGATGGT GGACATGGCC CACTTCGCCG GTCTCGTGGC AGGCGGCGCC
CATCCCTCGC CCTTCCCGCA TGCGGACGTG GCCACCACCA CGACGCACAA GACGCTGCGC
GGCCCGCGCG GCGGCATGAT CCTGACGAAC AGCGAGGAGA TCGCGAAGAA GGTCAACTCG
GCCATCTTCC CGGGCATCCA GGGCGGTCCG CTGATGCATG TGATCGCGGC CAAGGCGGTG
GCCTTCGGCG AGGCGCTGCG GCCCGAGTTC AAGGCCTATG CCGCGCAGGT GGTCAAGAAC
GCGCAGGCGC TGGCGGACGA GCTGATGAAG GGCGGGCTCG ACATCGTGAC GGGCGGCACC
GACACGCACC TGATGCTCGT GGACCTGCGG CCCAAGGGCG TGAAGGGCAA CGCGACCGAG
AAGGCGCTGG GCCGCGCCCA CATCACCTGC AACAAGAACG GCATCCCGTT CGACCCCGAG
AAGCCGACCG TGACCTCGGG CGTCCGGCTC GGCACGCCCG CGGGCACCAC CCGCGGCTTC
GGTGAGGCGG AGTTCCGCGA GATCGGCCGG CTGATCGTCG AAGTGGTCGA CGGGCTCGCG
GCCAACGGCG AAGAGGGCAA TGCGGCGGTG GAAGAGGCCG TGAAGGCCAA GGTCGCGGCG
CTCTGCGCCC GCTTCCCGCT CTATCCGACG CTCTGA
 
Protein sequence
MNAPHRDDGF FTESLSSRDP ELFASITGEL GRQRDEIELI ASENIVSRAV MEAQGSVMTN 
KYAEGYAGKR YYGGCDYVDV AETLAIERAK QLFGCAYVNV QPNSGSQANQ GVFQALIKPG
DTILGMELAS GGHLTHGAAP NQSGKWFNAV QYGVRQQDQL IDYDQVAALA REHKPKLIIA
GGSAIPRQID FARFRAIADE VGALLMVDMA HFAGLVAGGA HPSPFPHADV ATTTTHKTLR
GPRGGMILTN SEEIAKKVNS AIFPGIQGGP LMHVIAAKAV AFGEALRPEF KAYAAQVVKN
AQALADELMK GGLDIVTGGT DTHLMLVDLR PKGVKGNATE KALGRAHITC NKNGIPFDPE
KPTVTSGVRL GTPAGTTRGF GEAEFREIGR LIVEVVDGLA ANGEEGNAAV EEAVKAKVAA
LCARFPLYPT L