| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_2459 |
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| Symbol | |
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| ID | 4897143 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009049 |
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| Strand | + |
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| Start bp | 2591481 |
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| End bp | 2592620 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640113057 |
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| Product | histone deacetylase superfamily protein |
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| Protein accession | YP_001044333 |
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| Protein GI | 126463219 |
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| COG category | [B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.08307 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCACGG GCTTCTTCTG GGACGAGCGG TGCTTCTGGC ATCACGGCGG CAATTACGCC
CTGACGCTGC CGGTGGGCGG CCTCGTCCAG CCGGGCGCCG GCCTGCCCGA GAGCCCCGAG
ACCAAGCGAC GGCTGAAGAA CCTCATCGAG GTCACCGGCC TCGCAGGCGC GCTCCGGATG
CAGGGCGCCC CGCCCGCCTC CGAGGAGGAG CTGCGCCGCG TCCATCCCGC CGCCTACCTG
ACCGCGTTCA AGGCGCTCTC CGACCGCGGC GGCGGCGAGC TCGGCCTGCG CAGCCCCTTC
GGCCGCGACG GCTACGAGAC GGCGGCCCTC TCCGCGGGCC TCGCCACGGC GGCGCTCCGG
GAGGTGCTCG AAGGCCGCCT CGCCAATGCC TATGCGCTGA GCCGCCCGCC GGGGCACCAT
TGCCTGCCCG ACTGGCCGAA CGGCTTCTGC CTTCTGGCCA ATATCGCCAT CGCGGTCGAA
GCTGCCCTGG CCGAGAAGCG GGCGGAGCGG ATCGCGGTGG TGGACTGGGA CGTTCATCAC
GGCAACGGGA CCGAGGCGAT CTTCCTCTCC CGCCCCGAGG TCCTGACCGT CTCGCTGCAT
CAGGAGCGGA ACTATCCGCT CGACACCGGC GGGGCGGAGG TGCGCGGCGA GGGTCCGGGG
CACGGGGCGA ACCTCAACAT TCCGCTGCCG CCCGGCACCG GACACCGCGG CTATCTCGAG
GCCATGGACC GGCTGGTGCT GCCCGCGCTC CGCCGTCACC GGCCCGACGC GATCGTGGTG
GCCTGCGGCT TCGACGCCTC GGCCATGGAA CCTCTCGGCC GCATGATGGC GTCGGCCGAC
ACCTTCCGTG AGATGACGCG GAGGATGAAG GAAGCTGCGG CCGATCTCTG CGAAGGGCGG
CTCGTCCTCG TCCACGAGGG CGGCTATTCC GAGGTTCATG TGCCCTTCTG CGGCCATGCG
GTGCTGGAAG AGCTCTCGGA GAGCGGCATT CCTGCCCCCG ATCCGCTCGG CGCCACGATT
CGCGCGCGCC AGCCCGGCCC CGGCTTCGAC CGGTTCCTGA GCGAGCATCT CTCGGATCTC
GCCGCCCATT TCGGGCTGGG CGGGCCGCGC CCCCCGGGTC CCGCCCCCAC CGCGTCCTGA
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| Protein sequence | MATGFFWDER CFWHHGGNYA LTLPVGGLVQ PGAGLPESPE TKRRLKNLIE VTGLAGALRM
QGAPPASEEE LRRVHPAAYL TAFKALSDRG GGELGLRSPF GRDGYETAAL SAGLATAALR
EVLEGRLANA YALSRPPGHH CLPDWPNGFC LLANIAIAVE AALAEKRAER IAVVDWDVHH
GNGTEAIFLS RPEVLTVSLH QERNYPLDTG GAEVRGEGPG HGANLNIPLP PGTGHRGYLE
AMDRLVLPAL RRHRPDAIVV ACGFDASAME PLGRMMASAD TFREMTRRMK EAAADLCEGR
LVLVHEGGYS EVHVPFCGHA VLEELSESGI PAPDPLGATI RARQPGPGFD RFLSEHLSDL
AAHFGLGGPR PPGPAPTAS
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