Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_2432 |
Symbol | |
ID | 4897893 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009049 |
Strand | - |
Start bp | 2565503 |
End bp | 2566177 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 640113030 |
Product | ABC transporter related |
Protein accession | YP_001044306 |
Protein GI | 126463192 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.109204 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0982915 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGAGA TGCTGGTTCT GGACGGGCTG ACCAAGGCCT ACAACCGCGG CAAGCCGGGC GAGGTGACGG TGCTGCGCGG CGCCACGCTC TCGGTGGGCG CGGGCGAGGT TGTGGCGCTG GTGGCGCCCT CGGGGGCGGG GAAATCCACC CTGCTCCATA TCGCGGGGCT GCTCGACACG CCCGACGAGG GGCGCGTGGC CATCGGCGGG ACCGAGATGG CGGGGCTCGG CGACCGGGCG CGGACCGGGA CGCGGCGGCG CGAGGTGGGC TTCATCTACC AGTTCCACCA TCTCCTGCCC GAATTCACCG CGCTCGAGAA TGTGGTGCTG CCGCAACTGG CCAACGGGGT GGCGCGGACG GCGGCCGTGG CGCGGGCGCG CGACCTTCTG CGCCGCGTGG GGGTGGGCGC GCGCGAGGGC CATCGGCCTG CCGCCCTCTC GGGCGGCGAG CAGCAGCGCG TGGCCTTCTG CCGGGCGCTC GCCAACGCCC CGCGGCTGCT TCTGGCCGAC GAGCCCACGG GCAACCTCGA TCCCGGCACC TCGGATCAGG TGTTCGGCGT GCTGATGGAT CTGGTGCGCG GAACCGGCCT CTCCGCCCTC ATCGCCACCC ACAATCTCGA GCTGGCCGCG CGGATGGACC GGGTGGTGCG GCTCGAGGCG GGTCGGGTCG TCTGA
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Protein sequence | MSEMLVLDGL TKAYNRGKPG EVTVLRGATL SVGAGEVVAL VAPSGAGKST LLHIAGLLDT PDEGRVAIGG TEMAGLGDRA RTGTRRREVG FIYQFHHLLP EFTALENVVL PQLANGVART AAVARARDLL RRVGVGAREG HRPAALSGGE QQRVAFCRAL ANAPRLLLAD EPTGNLDPGT SDQVFGVLMD LVRGTGLSAL IATHNLELAA RMDRVVRLEA GRVV
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