Gene Rsph17029_2432 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_2432 
Symbol 
ID4897893 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009049 
Strand
Start bp2565503 
End bp2566177 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content73% 
IMG OID640113030 
ProductABC transporter related 
Protein accessionYP_001044306 
Protein GI126463192 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.109204 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0982915 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGAGA TGCTGGTTCT GGACGGGCTG ACCAAGGCCT ACAACCGCGG CAAGCCGGGC 
GAGGTGACGG TGCTGCGCGG CGCCACGCTC TCGGTGGGCG CGGGCGAGGT TGTGGCGCTG
GTGGCGCCCT CGGGGGCGGG GAAATCCACC CTGCTCCATA TCGCGGGGCT GCTCGACACG
CCCGACGAGG GGCGCGTGGC CATCGGCGGG ACCGAGATGG CGGGGCTCGG CGACCGGGCG
CGGACCGGGA CGCGGCGGCG CGAGGTGGGC TTCATCTACC AGTTCCACCA TCTCCTGCCC
GAATTCACCG CGCTCGAGAA TGTGGTGCTG CCGCAACTGG CCAACGGGGT GGCGCGGACG
GCGGCCGTGG CGCGGGCGCG CGACCTTCTG CGCCGCGTGG GGGTGGGCGC GCGCGAGGGC
CATCGGCCTG CCGCCCTCTC GGGCGGCGAG CAGCAGCGCG TGGCCTTCTG CCGGGCGCTC
GCCAACGCCC CGCGGCTGCT TCTGGCCGAC GAGCCCACGG GCAACCTCGA TCCCGGCACC
TCGGATCAGG TGTTCGGCGT GCTGATGGAT CTGGTGCGCG GAACCGGCCT CTCCGCCCTC
ATCGCCACCC ACAATCTCGA GCTGGCCGCG CGGATGGACC GGGTGGTGCG GCTCGAGGCG
GGTCGGGTCG TCTGA
 
Protein sequence
MSEMLVLDGL TKAYNRGKPG EVTVLRGATL SVGAGEVVAL VAPSGAGKST LLHIAGLLDT 
PDEGRVAIGG TEMAGLGDRA RTGTRRREVG FIYQFHHLLP EFTALENVVL PQLANGVART
AAVARARDLL RRVGVGAREG HRPAALSGGE QQRVAFCRAL ANAPRLLLAD EPTGNLDPGT
SDQVFGVLMD LVRGTGLSAL IATHNLELAA RMDRVVRLEA GRVV