Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_2429 |
Symbol | |
ID | 4897879 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009049 |
Strand | - |
Start bp | 2560938 |
End bp | 2562158 |
Gene Length | 1221 bp |
Protein Length | 406 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640113027 |
Product | mannonate dehydratase |
Protein accession | YP_001044303 |
Protein GI | 126463189 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1312] D-mannonate dehydratase |
TIGRFAM ID | [TIGR00695] mannonate dehydratase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.328404 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0532217 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGGCAGA CATGGCGGTG GTTCGGACCG AAGGACCTCG TGTCGGTGGA CGACATGCGG CAGGCGGGGG TGGAGGGCGT CGTCTCGGCG CTGCATCACA TTCCCACCGG CGCGCTCTGG ACGCCCGAGG AGATCGCCCG CCGCCAGCGC GAGATCGGGG TGATGCGCGA CGGGGCGGCC TCGGGCCTCA ACTGGGAGGT GGTCGAGAGC CTGCCCGTGT CCGAGGACAT CAAGAAGCAG AAGGGCGAGT GGCGCGCCCA TCTCGAGACC TGGAAGGCCT CGATGCGCAA TCTCCGCGCG GCGGGGATCG AGGTGATCTG CTACAATTTC ATGCCAGTGC TCGACTGGAC GCGGACGGAT CTCGCCTGGC GGCGGCCGTC GGGCGCGACC TGCATGCGGT TCGACCTGAC CGATTTCGCG GCCTTCGACA TCCATATCCT CGAGCGGCCC GGCGCGGCCG GGGAACTGCC CGCGGCGGTG GTCGAGGAGG CGGCGCGGCG CTTTGCCGAG ATGGACGGGA CCCGCCGGAC CGAGCTTGCC CGCAACGTGG TCTTCGGCCT GCCGGGGGCG GCCGAGCAGT TCACGCTCGA CGATGTGCGC CGGCACCTGT CGGACTATGC CGCCATGCGC CCCGAGACGC TGCGCCGGCA TCTGGTGGAC TTCCTGTCCG AGGTGGCGCC GCTCGCCGAG GAGCTGGGCG TGCGGCTCTG CTGCCATCCC GACGATCCGC CCTTCCCGCT GCTGGGCCTG CCGCGGATCA TGTCGACCGA GGCCGACTAT GCCGCGGTGA TGGAGGCGGT GGACCTGAAG GCCAATGGCA TCACGCTCTG CACGGGCAGC CTCGGCGCAC GGGCCGAGAA CGACCTGCCG GGGATGATGG AGCGGCTGGG CGACCGGGTG CATTTCCTGC ATCTGCGCAA CGTGACGCTG GAGCGGGACG GGGACGCGCT GCGCAACTCC TTCTTCGAGG ACGGCCATCT GGAGGGCGGT ACCGACATGG TGGCGATGAT CGCGGCCATC CTCGCCGAGG AGCGGCGGCG CGAGGCCGAG GGACGCACGG ATATCTCGAT CCCGATGCGG CCCGACCACG GGCAGGACAT CCTCGACGAC CTCGGCCGCA AGGGCCAGCC GGGCTATCCT TCGATCGGGC GGCTGAAGGG GCTGGCCGAG CTGCGCGGGA TCATGACGGC GCTCGACCAT CCGCTGGTGC GCGGGGCCTG A
|
Protein sequence | MRQTWRWFGP KDLVSVDDMR QAGVEGVVSA LHHIPTGALW TPEEIARRQR EIGVMRDGAA SGLNWEVVES LPVSEDIKKQ KGEWRAHLET WKASMRNLRA AGIEVICYNF MPVLDWTRTD LAWRRPSGAT CMRFDLTDFA AFDIHILERP GAAGELPAAV VEEAARRFAE MDGTRRTELA RNVVFGLPGA AEQFTLDDVR RHLSDYAAMR PETLRRHLVD FLSEVAPLAE ELGVRLCCHP DDPPFPLLGL PRIMSTEADY AAVMEAVDLK ANGITLCTGS LGARAENDLP GMMERLGDRV HFLHLRNVTL ERDGDALRNS FFEDGHLEGG TDMVAMIAAI LAEERRREAE GRTDISIPMR PDHGQDILDD LGRKGQPGYP SIGRLKGLAE LRGIMTALDH PLVRGA
|
| |