| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_2384 |
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| Symbol | |
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| ID | 4897404 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009049 |
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| Strand | + |
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| Start bp | 2519439 |
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| End bp | 2520704 |
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| Gene Length | 1266 bp |
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| Protein Length | 421 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640112981 |
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| Product | diaminopimelate decarboxylase |
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| Protein accession | YP_001044258 |
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| Protein GI | 126463144 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.193755 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.99015 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCATT TCCTCTACCG CAACGGGTCG CTCCACGCCG AGGAGGTGCC GCTCTCGGAC
ATCGCCGCGA CCGTCGGCAC GCCCTTCTAC TGCTACTCGG CGGCCACGCT CGAACGGCAC
TACCGGCTCT TCACCGAGGC GCTGACGCCC CTGCCGCATC TGGTCTGCTT CGCAATCAAG
TCGCTGTCGA ACCTCGCGGT GCTGAAGCTT CTGGGCGATC TCGGCGCGGG GATGGATGTG
GTCTCGGCGG GCGAATATCT GCGCGCGCGC GCTGCGGGTG TGCCGGGCGA CCGGATCGTC
TTCTCGGGCG TGGGCAAGAC CCGCGAGGAG ATGCGGATCG CGCTCGAGGG CGGGATCCGG
CAGTTCAACG TGGAATCCGA GCCCGAGATG CGGGCGCTGT CCGAGGTGGC CTCCTCGATG
GGGCTGCGCG CGCCCATCGC CGTGCGGGTG AACCCCGACG TCGATGCCCG CACCCACGAG
AAGATCGCCA CCGGCAAGAA AGAGAACAAG TTCGGCATCC CGATAGAGCG CGCCTCCGAG
GTTTATGCCG AGGCCGCGGC CTTGCCCGGG CTCGAGGTCA TGGGGATCGA CGTCCATATC
GGCTCGCAGC TGACCGAGCT CGAGCCCTTC GAGCAGGCCT ATCTGAAGGT GGCGGAGCTC
ACCGGCCGGC TGCGCGCCGA GGGCCACGAG ATCCGCAGGC TCGACCTCGG CGGCGGTCTG
GGCATCCCCT ACACCCGCTC GAACGAGGCC CCGCCGCTGC CCACCGATTA TGGCGCGCTC
ATCAAGCGCA CCGTGGGCCA TCTCGGCTGC GAGATCGAGA TCGAGCCCGG GCGGCTGATC
TCGGGCAATT CGGGCGTGCT GGTGAGCCGG GTCATCTATG TCAAGAACGG CGAGGGACGC
GACTTCCTGA TCCTCGACGC GGCGATGAAC GATCTCGTGC GGCCCTCGAT GTATGGCGCG
CACCACGACA TCGTGCCGCT GGCGGAGGCC GCGCCGGGCA CCGACAGCCA GCCCTACGAT
GTGGTGGGCC CGGTCTGCGA GACGGGCGAC ACCTTCGCCA AGGCGCGCGC GCTGCCGCCG
ATGGCCGAGG GCGATCTGGT GGCCTTCCGC TCGGCCGGGG CCTATGGCGC GGTGATGGCC
TCGGAGTACA ATTCCCGCCC GCTGGTGCCC GAGGTTCTGG TGCGCGGGGA TCACTTCGCC
GTCATACGGG CGAGACCGAC GTTTGACGAA ATGCTCGGCC GCGATAGCAT CCCCGAATGG
CTGTGA
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| Protein sequence | MDHFLYRNGS LHAEEVPLSD IAATVGTPFY CYSAATLERH YRLFTEALTP LPHLVCFAIK
SLSNLAVLKL LGDLGAGMDV VSAGEYLRAR AAGVPGDRIV FSGVGKTREE MRIALEGGIR
QFNVESEPEM RALSEVASSM GLRAPIAVRV NPDVDARTHE KIATGKKENK FGIPIERASE
VYAEAAALPG LEVMGIDVHI GSQLTELEPF EQAYLKVAEL TGRLRAEGHE IRRLDLGGGL
GIPYTRSNEA PPLPTDYGAL IKRTVGHLGC EIEIEPGRLI SGNSGVLVSR VIYVKNGEGR
DFLILDAAMN DLVRPSMYGA HHDIVPLAEA APGTDSQPYD VVGPVCETGD TFAKARALPP
MAEGDLVAFR SAGAYGAVMA SEYNSRPLVP EVLVRGDHFA VIRARPTFDE MLGRDSIPEW
L
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