Gene Rsph17029_2374 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_2374 
Symbol 
ID4897222 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009049 
Strand
Start bp2511556 
End bp2512254 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content70% 
IMG OID640112971 
Productphosphatidylserine decarboxylase 
Protein accessionYP_001044248 
Protein GI126463134 
COG category[I] Lipid transport and metabolism 
COG ID[COG0688] Phosphatidylserine decarboxylase 
TIGRFAM ID[TIGR00164] phosphatidylserine decarboxylase precursor-related protein 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.422276 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGATCG ACCTGCTCTC GACCTTCATC AAGCCGATGC ACCGCGAGGG CACCAAGTTC 
GTCGCCATCT TCGCCGTGGT CACGCTCGTC CTGTTCCTGA TCTGGGAGCC GCTCGGCTGG
ATCGGCGTGG GCCTCACGGT CTGGTGCTAC TACTTCTTCC GCGATCCGGT GCGCGTCACG
CCGACGCGTG AGGGGCTGAT CGTAAGCCCG GCCGACGGGG TCGTGTCGCT GATCGAGCCC
GCCGTGCCGC CGGCCGAGCT CGGCATGGGC CCCGCGCCCA TGACCCGCGT CTCGGTCTTC
ATGAACGTCT TCGACTGCCA TGTGAACCGT GCGCCCATCG GCGGCACGGT GACGGCCGTC
GCCTATCGTC CGGGCAAGTT CCTGAACGCC TCGCTCGACA AGGCGAGCGA GGACAACGAG
CGCAATGCGC TGGCGATCCG TCTCGCCGAC GGCCGCCAGA TCGCCGTCGT GCAGATCGCG
GGCCTCGTGG CGCGCCGGAT CCTCTGCGAG GTGCGCGAGG GCACGCCGCT GCTGACGGGC
GAGCGGTTCG GGATGATCCG CTTCGGCTCG CGGCTCGACG TCTATCTGCC CGAGGGCGTG
CAGCCGCTCG TCTGCCTCGG TCAGGTCATG ACCTCGGGCG AGACCGTGCT TGCCGACCTC
ACCAGCCCGG AGGCGCGCCG CACCGGCGCG GCGCGCTGA
 
Protein sequence
MAIDLLSTFI KPMHREGTKF VAIFAVVTLV LFLIWEPLGW IGVGLTVWCY YFFRDPVRVT 
PTREGLIVSP ADGVVSLIEP AVPPAELGMG PAPMTRVSVF MNVFDCHVNR APIGGTVTAV
AYRPGKFLNA SLDKASEDNE RNALAIRLAD GRQIAVVQIA GLVARRILCE VREGTPLLTG
ERFGMIRFGS RLDVYLPEGV QPLVCLGQVM TSGETVLADL TSPEARRTGA AR