Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_2374 |
Symbol | |
ID | 4897222 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009049 |
Strand | + |
Start bp | 2511556 |
End bp | 2512254 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640112971 |
Product | phosphatidylserine decarboxylase |
Protein accession | YP_001044248 |
Protein GI | 126463134 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0688] Phosphatidylserine decarboxylase |
TIGRFAM ID | [TIGR00164] phosphatidylserine decarboxylase precursor-related protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.422276 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCGATCG ACCTGCTCTC GACCTTCATC AAGCCGATGC ACCGCGAGGG CACCAAGTTC GTCGCCATCT TCGCCGTGGT CACGCTCGTC CTGTTCCTGA TCTGGGAGCC GCTCGGCTGG ATCGGCGTGG GCCTCACGGT CTGGTGCTAC TACTTCTTCC GCGATCCGGT GCGCGTCACG CCGACGCGTG AGGGGCTGAT CGTAAGCCCG GCCGACGGGG TCGTGTCGCT GATCGAGCCC GCCGTGCCGC CGGCCGAGCT CGGCATGGGC CCCGCGCCCA TGACCCGCGT CTCGGTCTTC ATGAACGTCT TCGACTGCCA TGTGAACCGT GCGCCCATCG GCGGCACGGT GACGGCCGTC GCCTATCGTC CGGGCAAGTT CCTGAACGCC TCGCTCGACA AGGCGAGCGA GGACAACGAG CGCAATGCGC TGGCGATCCG TCTCGCCGAC GGCCGCCAGA TCGCCGTCGT GCAGATCGCG GGCCTCGTGG CGCGCCGGAT CCTCTGCGAG GTGCGCGAGG GCACGCCGCT GCTGACGGGC GAGCGGTTCG GGATGATCCG CTTCGGCTCG CGGCTCGACG TCTATCTGCC CGAGGGCGTG CAGCCGCTCG TCTGCCTCGG TCAGGTCATG ACCTCGGGCG AGACCGTGCT TGCCGACCTC ACCAGCCCGG AGGCGCGCCG CACCGGCGCG GCGCGCTGA
|
Protein sequence | MAIDLLSTFI KPMHREGTKF VAIFAVVTLV LFLIWEPLGW IGVGLTVWCY YFFRDPVRVT PTREGLIVSP ADGVVSLIEP AVPPAELGMG PAPMTRVSVF MNVFDCHVNR APIGGTVTAV AYRPGKFLNA SLDKASEDNE RNALAIRLAD GRQIAVVQIA GLVARRILCE VREGTPLLTG ERFGMIRFGS RLDVYLPEGV QPLVCLGQVM TSGETVLADL TSPEARRTGA AR
|
| |