Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_2356 |
Symbol | |
ID | 4897051 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009049 |
Strand | - |
Start bp | 2491659 |
End bp | 2493290 |
Gene Length | 1632 bp |
Protein Length | 543 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640112952 |
Product | ABC transporter related |
Protein accession | YP_001044230 |
Protein GI | 126463116 |
COG category | [R] General function prediction only |
COG ID | [COG4172] ABC-type uncharacterized transport system, duplicated ATPase component |
TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.10022 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCGGCC GCGACGCCAG CGACGCGGGG GCGCCCGTCC TCGACGTGTC GAACCTCACC GTCCGCTTCC GGCAGGACGG GCGGACCGTC GAGGCGGTGA AGGGCGTCTC CTTCACCGTC GGGCGCGGCG AGACCGTGGC GCTGGTGGGC GAGAGCGGAT CGGGCAAGTC GGTGACGGCG CTCTCGACCG TGGCACTCCT GCCCGACAGC GCCGAGGTCG GCGGATCGGT CCGCTACGAG GGCCGCGAGA TGGTGGGCGC CCCCGCGGCC GAGCTGCGCC GGGTGCGCGG CAACGACATC AGCTTCATCT TTCAGGAGCC GATGACCTCG CTCAACCCGC TGCACACGAT CGAGCGGCAG ATCGGCGAGA GCCTCGCGCT GCATCAGGGC CTCGCCGGAG AGGCGGCGCG GGTGCGGATC CTCGAGCTGC TGACCAAGGT CGGCATCCGC GATCCCGAGA CGCGGCTCGG CGCCTATCCG CATCAGCTGT CGGGCGGGCA GCGCCAGCGT GTGATGATCG CCATGGCGCT GGCCAACGGG CCGGATCTGC TGATCGCCGA CGAGCCCACG ACCGCGCTCG ACGTGACGAT CCAGGCGCAG ATCCTCGACC TTCTGGCCGA GCTGAAGCGC ACCGAGGGGC TGAGCCTTCT GTTCATCACC CACGATCTGG GCGTGGTGCG CCGCATCGCC GACCGGGTCT GCGTCATGCA GGGCGGCGCC ATCGTCGAGC AGGGCCCGGC GCGGCGCATC TTCGAGGCGC CGGAACATCC CTATACCCGG AAGCTCCTCG CGGCGGAGCC CACGGGCCGG CCCGATCCGG TGCCCGAGGG GGCCCGGGAA ATCGTGCGGA CCGACGGGCT GCGGATCTGG TTTCCGATCC AGCGCGGGAT CCTCCGGCGG ACGGTCGGCC ATGTGAAGGC CGTGAACGGC GTCAGCCTCT CGATCCGCGA GGGCGAGACG CTGGGCGTGG TGGGCGAGAG CGGCTCGGGC AAGACGACGC TCGGGCTCGG CATTCTGCGG CTGATCGAGT CCGAGGGGCC GATCCTCTTT CTCGGGCAGG AGATCCACAG CCGCCGGTCG CGGGCGCTGC GCGAGATCCG GCGCGACATG CAGATCGTGT TTCAGGACCC GTATGGCAGC CTCTCGCCGC GGATGACGGT CGAGCAGATC GTGGCCGAGG GGCTGGGCGT GCATGGCGTC GAGCCGGGAC GCGACCGCCG CTCGATGGTG GCCGAGATCC TGACCGAGGT CGGGCTCGAT CCGGCGGCGA TGGGGCGCTA TCCGCACGAA TTCTCGGGCG GCCAGCGCCA GCGCGTGGCC ATCGCCCGCG CCATGATCCT GCGGCCGAAG TTCGTCGTGC TGGACGAGCC GACCAGCGCG CTCGACATGA CTGTGCAGGT GCAGATCGTG GACCTGCTGC GCGACCTGCA GCGGAAATGG GGTCTGGCCT ACCTTTTCAT CAGCCACGAC CTGCGGGTGG TGCGCGCCCT CTCGCACAAG GTGATCGTGA TCAAGGAGGG CAATGTCGTC GAAGCGGGGG AGGGGGCTGC GCTCTTCGCC GCGCCGCAGA CCGACTATAC CCGCACGCTT CTGGCGGCGG CCTTCGGAGA CGCGGTGCCC GAAGCCGTGT GA
|
Protein sequence | MTGRDASDAG APVLDVSNLT VRFRQDGRTV EAVKGVSFTV GRGETVALVG ESGSGKSVTA LSTVALLPDS AEVGGSVRYE GREMVGAPAA ELRRVRGNDI SFIFQEPMTS LNPLHTIERQ IGESLALHQG LAGEAARVRI LELLTKVGIR DPETRLGAYP HQLSGGQRQR VMIAMALANG PDLLIADEPT TALDVTIQAQ ILDLLAELKR TEGLSLLFIT HDLGVVRRIA DRVCVMQGGA IVEQGPARRI FEAPEHPYTR KLLAAEPTGR PDPVPEGARE IVRTDGLRIW FPIQRGILRR TVGHVKAVNG VSLSIREGET LGVVGESGSG KTTLGLGILR LIESEGPILF LGQEIHSRRS RALREIRRDM QIVFQDPYGS LSPRMTVEQI VAEGLGVHGV EPGRDRRSMV AEILTEVGLD PAAMGRYPHE FSGGQRQRVA IARAMILRPK FVVLDEPTSA LDMTVQVQIV DLLRDLQRKW GLAYLFISHD LRVVRALSHK VIVIKEGNVV EAGEGAALFA APQTDYTRTL LAAAFGDAVP EAV
|
| |