| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_2352 |
|---|
| Symbol | |
|---|
| ID | 4896978 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17029 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009049 |
|---|
| Strand | + |
|---|
| Start bp | 2487330 |
|---|
| End bp | 2488178 |
|---|
| Gene Length | 849 bp |
|---|
| Protein Length | 282 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640112948 |
|---|
| Product | UspA domain-containing protein |
|---|
| Protein accession | YP_001044226 |
|---|
| Protein GI | 126463112 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.229476 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.139893 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCTATA AATCCTTGCT GACGGTGGCC ACTTCGCCCG AGCGAGTCGA GCCGGCGATC
ACCGTTGCAT CGCGCCTCGC CCTGAGCAGC GACGCGCATC TCGACGTGCT GGCGCTTGGC
ATCGATGGCA CCCAGGTGGC CTACTACAAC ATGGGCGGCA CGGCGGTCGT GCTGCAGATG
GCGCTGGAAC GCGCCGAACA GGAAGCGCAG GCGGTCGAGA AGGCGGCGGC GGCGGCGCTG
TCGGCCCAGC CCGCGATGCT GCGCGCGTCG GTCGAGTCGG CCGTGGCGCA GATGGGCGGG
CTCGCTGGGC TGGTGGCGCT GCGCTCGCGC TTTGCCGATC TCGTCGTGCT GTCCCGCCCC
TACGGCAAGG GCCGGGGCGC GGAAACCGAA GCCGTGGTCG AGGCCGCGCT CTTCGAGGGT
CAGGCGCCGG TTCTGGTGGT GCCCGATGAT CCGGCCCTGA GCGAGCGGTT CGGCCACCGG
ATCGTCATCG CCTGGGACCA GAGCCGCGAG GCGCTGACGG CGGTGCGCAA GGCCATGCCG
TTCCTTCTGC GCGCCGACAA TGTGGACATC GTGATCGTCG ATCCCGCGGC CCATGGAGCC
GAACGGTCGG ATCCGGGCGG CGCGCTCTGC CAGATGCTCG TGCGCCACGG GGTCCGGGCC
GAGGTTTCGG TGCTGGCCAA GACGATGCCG CGCATTTCCG ACGTGATCGC GCGCCATGTG
CGCGATCAGG ATGCCGATCT TCTGGTGATG GGCGCCTACG GCCATTCCCG CTTCCGCGAG
GCGATCCTCG GCGGGGCCAC GCGGGACATG CTCGAACTGG CGGAAGTGCC CGTCCTGATG
GCGCACTGA
|
|---|
| Protein sequence | MAYKSLLTVA TSPERVEPAI TVASRLALSS DAHLDVLALG IDGTQVAYYN MGGTAVVLQM
ALERAEQEAQ AVEKAAAAAL SAQPAMLRAS VESAVAQMGG LAGLVALRSR FADLVVLSRP
YGKGRGAETE AVVEAALFEG QAPVLVVPDD PALSERFGHR IVIAWDQSRE ALTAVRKAMP
FLLRADNVDI VIVDPAAHGA ERSDPGGALC QMLVRHGVRA EVSVLAKTMP RISDVIARHV
RDQDADLLVM GAYGHSRFRE AILGGATRDM LELAEVPVLM AH
|
|---|
| |