| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_2339 |
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| Symbol | |
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| ID | 4896700 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009049 |
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| Strand | - |
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| Start bp | 2474440 |
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| End bp | 2475249 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640112935 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001044213 |
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| Protein GI | 126463099 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.256384 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCTCA TCATTTCCGG CAAGACGGCC ATCGTGACCG GGGCCGCCGC CGGCATCGGC
CTCGCGGTGG CGCGGCACTT CGTCGACAAG GGCGCGAACG TGATGTTCGT GGACATGGAC
GAGGAACGGC TCGCCGACCA GATCGGCGAG GAGGCGCGGG CCGAGGGTCC GGTGCGCATG
TTCGCGGGTG ACCTGCGCGA GAAGCTGACG ATCACCAACC TCCTGTCGGC CACGATGGAT
GCCTTCGACC GGGTCGACAT TCTCGTGAAC GCGAGCCGTC AGGTGGCTTT GTCCGATCCG
CTCTGCCCGG AAGAGGATGC GGTCGAGACG CTTCTGCAGC AGAACATGCT GACCAGCCTG
CGCCTCACCC AGCTGACGGC CAAGCGGATG ATCGCGCGGG CCGAGAAGAG CGACGAGAAG
CCCACGCAGG TGGGCTCGAT CATCAACCTC TCCTCCATCG CCGCGATCCG CACCCAGCCC
GAGCTTCTGG CCTATTCGAT CAGCTGCGCC GCGGTCGAGC AGATGACGCG GTCGATGGCG
GTGGCGCTGG CCTCGAAGGG CATCCGGGTG AATGCGGTCT CCTTCGGCTC GGTCATGAGC
GCGAGCCTCC AGACCGCGCT GAAGGACAGC CCGGCGATGC GCGCCCAGAT CACCGAGCGC
ACGCCGATGA AGCGCATCGC CTCGCCGGCC GAGATCGTCG AGACGGTGCA GTTCCTCGCC
TCGGACGCGG CGGCCTTCAT GACGGGACAG GTGGTGACGC TCGACGGCGG ACGCAGCCTG
ATCGACCCGG CCTTGGCGCC GGTGCACTGA
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| Protein sequence | MSLIISGKTA IVTGAAAGIG LAVARHFVDK GANVMFVDMD EERLADQIGE EARAEGPVRM
FAGDLREKLT ITNLLSATMD AFDRVDILVN ASRQVALSDP LCPEEDAVET LLQQNMLTSL
RLTQLTAKRM IARAEKSDEK PTQVGSIINL SSIAAIRTQP ELLAYSISCA AVEQMTRSMA
VALASKGIRV NAVSFGSVMS ASLQTALKDS PAMRAQITER TPMKRIASPA EIVETVQFLA
SDAAAFMTGQ VVTLDGGRSL IDPALAPVH
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