Gene Rsph17029_2325 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_2325 
Symbol 
ID4896252 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009049 
Strand
Start bp2460128 
End bp2460826 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content66% 
IMG OID640112921 
ProductMotA/TolQ/ExbB proton channel 
Protein accessionYP_001044199 
Protein GI126463085 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0811] Biopolymer transport proteins 
TIGRFAM ID[TIGR02796] TolQ protein 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.928005 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.316985 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAACGG AAACCCTCGC GATGGCGCAG GAGATTGATT TCTCCATGCT CGCCCTCTTC 
GCGCGCGCAA CGCTCACCGT GAAGTTCGTG ATGATCCTTC TGATCGTCAT GTCCTTCTGG
TCGTGGGCCA TCATCGTCCG CAAGCACCTC CTCTACCGGC AGGCCCGGCG CGAGGCGGCG
ATCTTTGACC GCGCCTTCTG GTCGGGCGAG CCGCTGGACG AGCTCTTCGA GCGTCTGGGG
CCGCAGCCCG AAGGCGCCTC CGAGAAGATC TTCGCGGCCG GCATGCTCGA ATGGCGGCGC
AGCCACCGCA ATGACGGCGG CCTGATCGCG GGCGCGCAGT CGCGCATCGA CCGCTCGATG
GGCGTGGCGA TCGACAAGGA GAGCGAGACC CTGAACTCGG GCCTGTCCTT CCTCGCCACC
ACCGGCTCGA CCGCGCCCTT CATCGGCCTC TTCGGTACGG TCTGGGGCAT CAAGCACGCC
TTCGAACAGA TCGCGATCTC GCAGAACACC AACCTCGCCG TCGTGGCGCC GGGCATCGCC
GAGGCGCTGC TGGCCACCGC CTTCGGCCTC GTCGCGGCCA TCCCGGCCGT GGTGTTCTAC
AACAAGCTCA ACGCGGACTC CGAGCGGATC ATCGGCGGCT ACGACGCCTT CTCCGACGAA
TTCGCGACGA TCCTGTCGCG TCAGCTGGAC GCGGCCTGA
 
Protein sequence
METETLAMAQ EIDFSMLALF ARATLTVKFV MILLIVMSFW SWAIIVRKHL LYRQARREAA 
IFDRAFWSGE PLDELFERLG PQPEGASEKI FAAGMLEWRR SHRNDGGLIA GAQSRIDRSM
GVAIDKESET LNSGLSFLAT TGSTAPFIGL FGTVWGIKHA FEQIAISQNT NLAVVAPGIA
EALLATAFGL VAAIPAVVFY NKLNADSERI IGGYDAFSDE FATILSRQLD AA