Gene Rsph17029_2308 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_2308 
Symbol 
ID4897940 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009049 
Strand
Start bp2440470 
End bp2441216 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content64% 
IMG OID640112904 
Producthypothetical protein 
Protein accessionYP_001044182 
Protein GI126463068 
COG category[S] Function unknown 
COG ID[COG0217] Uncharacterized conserved protein 
TIGRFAM ID[TIGR01033] DNA-binding regulatory protein, YebC/PmpR family 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.431489 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.117154 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGGCC ATTCCAAGTG GGCGAACATC CAGCATCGCA AGGGCAAGCA GGACAAGCTG 
CGCTCGAAGA TGTTCTCGAA GCTGGCGAAG GAGATCACCG TCGCCGCGAA GATGGGTGAC
CCCGACCCCG ACAAGAACCC GCGCCTGCGG CTGGCGGTGA AGGCGGCCAA GGCCGTCTCG
ATGCCCAAGG ACGTGATCGA GCGCGCGATC AAGAAGTCGC AGGGCGGCGA TGCCGAGGAT
TACTCGGAGA TCCGCTACGA GGGCTACGGG CCGAACGGCA TCGCCATCAT CGTCGAGACG
ATGACCGACA ACGTGAACCG CACCGCCTCG AACGTCCGCA GCTACTTCAC CAAATACGGC
GGCAACCTCG GCACCACGGG CTCGGTCAGC TTCATGTTCG ACCGCGTGGG CGAGATCACC
TACAAGCCCG AGGCGGGCGA CGCCGACACG GTGATGATGG CCGCCATCGA GGCCGGCGCC
GACGATGTCG AGTCGGACGA AGAGGGCCAC TGGATCTATT GCGGCGACAC CAGCCTCAAC
GAAGTGTCCG AAGCGCTCGA GAAGGTGCTG GGCGAGAGCG AGGAAGCCAA GCTCGTCTGG
AAGCCGCAGA ACCGCACCAA CGTCGATCTC GAGACGGCGC AGAAGCTGAT GAAGCTGATC
GACGCGCTCG AGGAGGACGA CGACGTCCAG ACCGTCACCG GCAACTTCGA CATCCCCGAG
GATGTGGCGG CGAAGCTCGA CGCCTGA
 
Protein sequence
MAGHSKWANI QHRKGKQDKL RSKMFSKLAK EITVAAKMGD PDPDKNPRLR LAVKAAKAVS 
MPKDVIERAI KKSQGGDAED YSEIRYEGYG PNGIAIIVET MTDNVNRTAS NVRSYFTKYG
GNLGTTGSVS FMFDRVGEIT YKPEAGDADT VMMAAIEAGA DDVESDEEGH WIYCGDTSLN
EVSEALEKVL GESEEAKLVW KPQNRTNVDL ETAQKLMKLI DALEEDDDVQ TVTGNFDIPE
DVAAKLDA