Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_2308 |
Symbol | |
ID | 4897940 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009049 |
Strand | - |
Start bp | 2440470 |
End bp | 2441216 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640112904 |
Product | hypothetical protein |
Protein accession | YP_001044182 |
Protein GI | 126463068 |
COG category | [S] Function unknown |
COG ID | [COG0217] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR01033] DNA-binding regulatory protein, YebC/PmpR family |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.431489 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.117154 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGGGCC ATTCCAAGTG GGCGAACATC CAGCATCGCA AGGGCAAGCA GGACAAGCTG CGCTCGAAGA TGTTCTCGAA GCTGGCGAAG GAGATCACCG TCGCCGCGAA GATGGGTGAC CCCGACCCCG ACAAGAACCC GCGCCTGCGG CTGGCGGTGA AGGCGGCCAA GGCCGTCTCG ATGCCCAAGG ACGTGATCGA GCGCGCGATC AAGAAGTCGC AGGGCGGCGA TGCCGAGGAT TACTCGGAGA TCCGCTACGA GGGCTACGGG CCGAACGGCA TCGCCATCAT CGTCGAGACG ATGACCGACA ACGTGAACCG CACCGCCTCG AACGTCCGCA GCTACTTCAC CAAATACGGC GGCAACCTCG GCACCACGGG CTCGGTCAGC TTCATGTTCG ACCGCGTGGG CGAGATCACC TACAAGCCCG AGGCGGGCGA CGCCGACACG GTGATGATGG CCGCCATCGA GGCCGGCGCC GACGATGTCG AGTCGGACGA AGAGGGCCAC TGGATCTATT GCGGCGACAC CAGCCTCAAC GAAGTGTCCG AAGCGCTCGA GAAGGTGCTG GGCGAGAGCG AGGAAGCCAA GCTCGTCTGG AAGCCGCAGA ACCGCACCAA CGTCGATCTC GAGACGGCGC AGAAGCTGAT GAAGCTGATC GACGCGCTCG AGGAGGACGA CGACGTCCAG ACCGTCACCG GCAACTTCGA CATCCCCGAG GATGTGGCGG CGAAGCTCGA CGCCTGA
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Protein sequence | MAGHSKWANI QHRKGKQDKL RSKMFSKLAK EITVAAKMGD PDPDKNPRLR LAVKAAKAVS MPKDVIERAI KKSQGGDAED YSEIRYEGYG PNGIAIIVET MTDNVNRTAS NVRSYFTKYG GNLGTTGSVS FMFDRVGEIT YKPEAGDADT VMMAAIEAGA DDVESDEEGH WIYCGDTSLN EVSEALEKVL GESEEAKLVW KPQNRTNVDL ETAQKLMKLI DALEEDDDVQ TVTGNFDIPE DVAAKLDA
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