| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_2296 |
|---|
| Symbol | |
|---|
| ID | 4895816 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17029 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009049 |
|---|
| Strand | + |
|---|
| Start bp | 2429232 |
|---|
| End bp | 2430857 |
|---|
| Gene Length | 1626 bp |
|---|
| Protein Length | 541 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640112892 |
|---|
| Product | signal transduction histidine kinase |
|---|
| Protein accession | YP_001044170 |
|---|
| Protein GI | 126463056 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3920] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0982064 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.378772 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGTGGTTGA GATCGTCCGC GGGACGTGAA GGCGGCGCGG GCGCGCCACT GTGGCTTGTC
TGGCCGCTCG CGGTGGCGGG ATATGTGCTC ATGGGCCGCC TCGGCCTCGT GACGGCCGTG
CCGCCCACCG GCGCGGTCGT GCTCTGGCCG CCGAACGCGG TGCTTCTCAC CGCTCTCCTC
GCCTCAGCCC CCCGCCACTG GCCCGTCGTT CTTCTAGGAG GCATCGCAGC CGAGGTCGCC
GTCAACTGGC ACACGCTGCC GATCGCCTGG GCGCTGGCCT TCGGCACCGT CAATGCCGCC
GAATCCACCC TTGCGGCCAG CCTCCTCAGA CGCTTCTCCG ACGGGCCCGT GCGGCTCGAC
GGGCTTGCCG CCGTCGTCCG GTTCGTGCTG CTGGCTCCGC TCGCGGCATC GGCCACCGCG
GCACTGGCCG GAGCCGCGCT CATCGCTCTT CGCTTTCCCG AGGTCGATTA CCTGCACACC
TGGCAGGTGT TCTGGCTCGG CGACGGGTTG GGACTGCTGA TCGTCGGGAC GACCCTTCTC
GTCTGGCTCG CCCCCCGCGC TGCACCCGAG GCGAAGATCC GGGGCCGCGG GCTCGAGGGG
CTTGTCCTCG CGGCGGGCCT ACTCTTCGTC TCGGTGCTGA CGCTCCGCCT CGATGCCGAT
CTGGGCCGCC TCTACCTGCT CTTCCCGTTC CTCGTCTGGA CGGCGCTGCG CTTCGGCATG
AAGGGGGCCA CGCTCGCCAT CCTGTCGATG ACCGCCGTCG CGACCTGGGC GATGATGGAC
GGCCGCGGCC CCTTCGTGGA TCTGGCCGGG ATCGATCAGG TGGCGGCGAG GCAGGTGCTG
ATTGCGGTGG TGGCTCTCTC CACCTTCATC CTCGCCGTAG CCGCCGACGA GCGCCGGCGG
GTCACCCGGC GGCTTCTCCA GTCGGTGCGC GAGCTGGAGC AGGCCCGCTT CGATCTGGAG
CGGATGAACG CGGACCTCGA CGAGATCGTG ACCGAGCGCA CCCGCGCGCT TCGCAGCACC
CTCGCCCGGA ACGAGATGCT GTTGCGCGAG GTGCATCACC GGGTGAAGAA CAACCTTCAG
CTCATCTCGA GCCTCGTGGC GCTGCAGCGG CGCGGCGTGC AGGAGCCCGC GATGCGCGAA
CGGATGGCGC GGATCCAGGG CCAGATCGGC GCCATCGCCA AGACCTACGA CCTGCTCCAC
CAGTTCGGCG CCAGCGAGAC GGTGGACTTC GGCCCGTTCG TGCCGGCGCT ATGCGCCGCC
ATTGAGGGGG CCGAGGGCGG GCGCGCCCGC ATCGAGGCCG AGCTGCAGGG CAGCGCGGAG
GTTTCGGCCG ACAGTGCCAT CGCCCTCTCG CTCGCGCTGA ACGAACTGGT GACCAATGCG
CTGAAACATG CAGGCCCCAC GCCCCGTATC CGCGTGGCCT GCGGCCGGGA GGGAGATGCG
CTCGTGCTGC GGGTCGAGGA TGACGGGCCG GGATTGCCCG AGGGGTTCGA GCTGACAGCG
CAGGCAGGCT TCGGCGTGCG GATGGTGGCG GGCCTCATCG GGCAGGCCGG CGGCACGATC
CGCACGCTTG CAACCGAAGG CGGCGCGGCC TTCGAGATCC GCGTGCCGGT GACCGGCGCC
GCCTGA
|
|---|
| Protein sequence | MWLRSSAGRE GGAGAPLWLV WPLAVAGYVL MGRLGLVTAV PPTGAVVLWP PNAVLLTALL
ASAPRHWPVV LLGGIAAEVA VNWHTLPIAW ALAFGTVNAA ESTLAASLLR RFSDGPVRLD
GLAAVVRFVL LAPLAASATA ALAGAALIAL RFPEVDYLHT WQVFWLGDGL GLLIVGTTLL
VWLAPRAAPE AKIRGRGLEG LVLAAGLLFV SVLTLRLDAD LGRLYLLFPF LVWTALRFGM
KGATLAILSM TAVATWAMMD GRGPFVDLAG IDQVAARQVL IAVVALSTFI LAVAADERRR
VTRRLLQSVR ELEQARFDLE RMNADLDEIV TERTRALRST LARNEMLLRE VHHRVKNNLQ
LISSLVALQR RGVQEPAMRE RMARIQGQIG AIAKTYDLLH QFGASETVDF GPFVPALCAA
IEGAEGGRAR IEAELQGSAE VSADSAIALS LALNELVTNA LKHAGPTPRI RVACGREGDA
LVLRVEDDGP GLPEGFELTA QAGFGVRMVA GLIGQAGGTI RTLATEGGAA FEIRVPVTGA
A
|
|---|
| |