Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_2270 |
Symbol | |
ID | 4896936 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009049 |
Strand | + |
Start bp | 2405026 |
End bp | 2405886 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640112864 |
Product | RNA polymerase sigma factor SigJ |
Protein accession | YP_001044144 |
Protein GI | 126463030 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.426969 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCGCCTG ACGTCTACCT GCAGATTTTC GAGACGCGGC GGCCCCAGCT GCTGCGTCTT GCTTATCGGA TGCTGGGCTC CCATGCCGAG GCCGAAGATG TGGTACAGGA GGCATGGATC CGCTGGCAGG CCGCCGATCA TGCGCAGATC GCCATCCCGG CGGCTTGGCT GAACCGGGTG GTGTCGCGCC TCTGTCTGGA CCTGATGCGC TCGGCCCGGC ACCGGCGCGA GAGCTACATC GGGCCTTGGC TGCCCGAACC GCTGATCGAA GAGGAGGATG CCGATCACCG CCCGGACAAC CTGACCCTGT CGCTGATGAT GGCGCTGGAG CGGCTGTCCC CGCTGGAGCG TGCCGCCTTC CTTCTGCATG ACGTCTTCGG CCAGTCCTTC GATGAGGTGG CGCTGGCCCT CGACCGCTCA CCTGCAGCGG CACGCCAGCT GGCGGTGCGC GCGCGGGCAC ATGTCCATAT CGACCGCCCG CGCTACAAGG TGGAGCGCGA GCCAGCGGAA GGCCTGACCC GCGCCTTCTT CGAGGCCTGC AAGACGGGCG ATGCGGCGGT TCTGTCGGGC CTCTTGGCCG AAGACGCGGT GCTGCATTCG GACGGTGGCG GCAAGGTCTA CAACCTGCTG AACGTGATCG TGGGCGCCCA AAAGCTGCTG CGGATGTTCA CCAGCCTGTC GCGCAAGCGG GGGGACGAGA TGGAATTCGT GCAATTCACC TTGATCGACG CTCTTCCCGG CTATGTCTGG CGAATGGGAG ACCAGATCCA GACCACCGCG CTGGAGGTCG AGGACGGCCG CATTACCCGG GTCTACACGA CACGCAATCC CGACAAGTTG ACCCGTATCA GGCTCAACTG A
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Protein sequence | MSPDVYLQIF ETRRPQLLRL AYRMLGSHAE AEDVVQEAWI RWQAADHAQI AIPAAWLNRV VSRLCLDLMR SARHRRESYI GPWLPEPLIE EEDADHRPDN LTLSLMMALE RLSPLERAAF LLHDVFGQSF DEVALALDRS PAAARQLAVR ARAHVHIDRP RYKVEREPAE GLTRAFFEAC KTGDAAVLSG LLAEDAVLHS DGGGKVYNLL NVIVGAQKLL RMFTSLSRKR GDEMEFVQFT LIDALPGYVW RMGDQIQTTA LEVEDGRITR VYTTRNPDKL TRIRLN
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