Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_2254 |
Symbol | rpoH2 |
ID | 4896822 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009049 |
Strand | - |
Start bp | 2387324 |
End bp | 2388202 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640112848 |
Product | RNA polymerase factor sigma-32 |
Protein accession | YP_001044129 |
Protein GI | 126463015 |
COG category | [K] Transcription |
COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
TIGRFAM ID | [TIGR02392] alternative sigma factor RpoH [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.142039 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.411948 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACTGG ACGGATATAC CGATCAAACG ATGTCGCGCC AAGCGATGAG GGCGGAGCTT CTGGACGCAG AGACGGAGCT GCGCCTCGCC TATGCCTGGC GGGACCAGCG CGACGAGCGG GCGCTCCACC GTCTGATCAC CGCCTACATG CGCCTTGCGA TCTCGATGGC CTCGAAATAC CGCCGCTACG GCGCGCCGAT GAACGACCTG ATTCAGGAGG CGTCGCTCGG GCTGATGAAG GCCGCCGACA AGTTCGACCC GGACCGCGGC GTGCGCTTCT CGACCTATGC CGTCTGGTGG ATCAAGGCCT CGATCCAGGA TTACGTCATG CGGAACTGGT CTCTGGTGCG GACCGGCTCC ACCTCCAGCC AGAAGGCGCT GTTCTTCAAC ATGCGGCGGG TGCAGGCCCG GCTCGAGCGC GAGGCCTCGC AGCGGGGCGA GGCGCTCGAT GCGCATCAGC TGCGCGAGAT GGTGGCTCAT GACGTGGGCG TGCCGCTCTC GGATGTCGAG ATGATGGAGG GGCGGCTCTC GGGCTCGGAC TTCTCGCTCA ACGCCACCCA GTCGGCCGAT GACGAGGGGC GGGAGTGGAT CGACGCGCTC GAGGACGATT CGGCACAGGC GGCCGAGGTG GTGGAGGGCT CGCTCGATGC CGCGCGGCTG CGGGGTTGGC TGGTGTCGGC CATGCAGCAG CTGAACGCGC GCGAGCGGTT CATCGTGACC GAACGCAAGC TGCGCGACGT GCCCCGGACG CTCGAAAGCC TCGGCGAAGA ACTGAAGCTT TCCAAGGAGC GGGTGCGGCA GCTTGAAGCA GCGGCCTTTG CGAAGATGCG GCGGAGCCTT GAAGCCCAGT CGCGGGAGGT GCATCACTTC CTCCTATGA
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Protein sequence | MALDGYTDQT MSRQAMRAEL LDAETELRLA YAWRDQRDER ALHRLITAYM RLAISMASKY RRYGAPMNDL IQEASLGLMK AADKFDPDRG VRFSTYAVWW IKASIQDYVM RNWSLVRTGS TSSQKALFFN MRRVQARLER EASQRGEALD AHQLREMVAH DVGVPLSDVE MMEGRLSGSD FSLNATQSAD DEGREWIDAL EDDSAQAAEV VEGSLDAARL RGWLVSAMQQ LNARERFIVT ERKLRDVPRT LESLGEELKL SKERVRQLEA AAFAKMRRSL EAQSREVHHF LL
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