Gene Rsph17029_2248 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_2248 
Symbol 
ID4897304 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009049 
Strand
Start bp2380924 
End bp2381439 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content73% 
IMG OID640112842 
ProductLipocalin family protein 
Protein accessionYP_001044123 
Protein GI126463009 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3040] Bacterial lipocalin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.385259 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCTG TGGCCCTGCT CGCCCTTCTT GCGCTTGTGG CCTGCGAGCG GCATGTGCCC 
TCGCAGCGCT GGCTGGGGGC GCCCCTCTTC CTCGATCCGG CGGTGCAGCC GGTCGATCTC
GCGGGCCGCT GGTATGAGGT GGCGAGCTAC CCCGCCCCGT TCCAGAGGGG CTGCACGGGC
ACCACGGCCG ACTACCAGCC GCTGCCGGAC GGGCGCATCG CGCTGACCAA CCGCTGCCGG
GTGGGCGGCA CGCTGCGCGA GATCTCGGGG ACGGCCGAGG TGGTGGCGCC GGGCAAGCTG
ACGGTGAACC TGCAGGGCGT GCCCTTCGGC GGCGACTACT GGATCCTCGG CCAGTCGCGC
GACGGGCGCA CGCTCGTGGT GGGCACGCCC ACGCGGATCG CGGGCTGGGT GCTGCACCGC
GACCCGAAGA TCGCGCCCGA GGAGCTGCGC GCGGCGCGCG ATCTCTTCGA GCGGAGCGGC
TACGATGCGG CCGCTCTCGA GCGTACGCGT CCGTAG
 
Protein sequence
MKAVALLALL ALVACERHVP SQRWLGAPLF LDPAVQPVDL AGRWYEVASY PAPFQRGCTG 
TTADYQPLPD GRIALTNRCR VGGTLREISG TAEVVAPGKL TVNLQGVPFG GDYWILGQSR
DGRTLVVGTP TRIAGWVLHR DPKIAPEELR AARDLFERSG YDAAALERTR P