Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_2248 |
Symbol | |
ID | 4897304 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009049 |
Strand | - |
Start bp | 2380924 |
End bp | 2381439 |
Gene Length | 516 bp |
Protein Length | 171 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 640112842 |
Product | Lipocalin family protein |
Protein accession | YP_001044123 |
Protein GI | 126463009 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3040] Bacterial lipocalin |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.385259 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAGCTG TGGCCCTGCT CGCCCTTCTT GCGCTTGTGG CCTGCGAGCG GCATGTGCCC TCGCAGCGCT GGCTGGGGGC GCCCCTCTTC CTCGATCCGG CGGTGCAGCC GGTCGATCTC GCGGGCCGCT GGTATGAGGT GGCGAGCTAC CCCGCCCCGT TCCAGAGGGG CTGCACGGGC ACCACGGCCG ACTACCAGCC GCTGCCGGAC GGGCGCATCG CGCTGACCAA CCGCTGCCGG GTGGGCGGCA CGCTGCGCGA GATCTCGGGG ACGGCCGAGG TGGTGGCGCC GGGCAAGCTG ACGGTGAACC TGCAGGGCGT GCCCTTCGGC GGCGACTACT GGATCCTCGG CCAGTCGCGC GACGGGCGCA CGCTCGTGGT GGGCACGCCC ACGCGGATCG CGGGCTGGGT GCTGCACCGC GACCCGAAGA TCGCGCCCGA GGAGCTGCGC GCGGCGCGCG ATCTCTTCGA GCGGAGCGGC TACGATGCGG CCGCTCTCGA GCGTACGCGT CCGTAG
|
Protein sequence | MKAVALLALL ALVACERHVP SQRWLGAPLF LDPAVQPVDL AGRWYEVASY PAPFQRGCTG TTADYQPLPD GRIALTNRCR VGGTLREISG TAEVVAPGKL TVNLQGVPFG GDYWILGQSR DGRTLVVGTP TRIAGWVLHR DPKIAPEELR AARDLFERSG YDAAALERTR P
|
| |