| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_2235 |
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| Symbol | |
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| ID | 4897801 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009049 |
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| Strand | + |
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| Start bp | 2368855 |
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| End bp | 2370312 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 640112829 |
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| Product | D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase |
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| Protein accession | YP_001044110 |
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| Protein GI | 126462996 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2027] D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) |
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| TIGRFAM ID | [TIGR00666] D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.755763 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTTCA CCCGGCGCTG GCTGCTCTCG GCGCTTCTGG CCAGCGCGGC CACACCGGTG
CTGGCCGAGG CCCCGCTCAC CTCGCCGCGC CCGCCGCGCC GCGGCTTTCT CGAGCCGCCG
CCCGAAGCGG GCGACCTCGT CGCGCGCGCG GCCCTCGGGG GCGCGGTGGC CTATGTGGTG
GCCGATGCCC GCAGCGGCAC CGTGCTCGAA GCCGCGAATG CCGCGCTCCG CCTGCCGCCC
GCCAGCACGG CCAAGACGGT GACGGCCCTC TACGGGCTCG AGACCCTCGG GCCCGACTTC
CGCTTCACGA CGCGGCTCCT CGCCACGGGA CCGGTCACGA ACGGCATCCT GCAGGGCGAC
CTCATCCTCT CGGGCTCGGG CGATCCCACG CTTTCGACCG ATGCGCTGGG CGAGATGGCG
GCGCGGCTCC GCGCCCGCGG CATCACCGGC ATCACCGGCC GCTATCTGGC CGATGCGAGC
GCGCTGCCCG CCGTGCCCTT GATCGATCCC GAACAGCCCG ACCATGTGGG CTACAACCCC
GCCCTCTCCG GCCTCAACCT CAACTTCAAC CGCGTGCATT TCGAGTGGAA GCAGGCGGCG
AAGGGCTGGT CGGTGACGAT GGACGCCCGC GCCGAGCGCT TCGTGCCGCC CGTGTCGATG
GCGCGGATGA AGGTCGTGAC GCGCGACCTG CCGATCTACA CCTATGCCGG CGATCAGGGC
TCGGACAGCT GGACGGTGGC GAGCGGCGCC CTCGGTGCGG CGGGCAGCCG CTGGCTGCCG
GTGCGCCATC CCGAGGCCTA CACCGCCGAA GTCTTCCAGA CCCTCGCCCG CGCGCAGGGC
ATCGAACTGC CCGCGGCGCA GGTCGTCCGG GTCCGCCCCG AAGGCGCGGC GCTGGTCGAG
TGGCAGAGCG ACCCCCTGCG CGAGATCCTG CGCGACATGC TGAAGTTCTC CACCAACATC
ACGGCCGAGG CGGTGGGCCT TGCGGCCTCG GGTGCGCCGT CGCTCGCGCA GTCGGCCGCC
GCCATGAGCG CCTGGGCCAA CCGGCGCTTC GGCCTCTCGA CCGCGTTCCA CGACCATTCC
GGGCTGGGCG GCGGCTCGCT CGTCTCGGCC GCGGACATGG TGACGGCGCT CCTTGCCGCC
GAGCGCGAGG GGCTCGGCCT GCGCCCGCTC CTGAAGCGGA CCGAGATCGG CGGCGGCAAG
GGCACGAAGA AGGGCGCGCG ACGGATCGCC GTCGCGGCCA AGACCGGCAC GCTCAACTTC
GTGTCGGGCC TCGTGGGCAT CGCCACGGCC CAAGACGGGC GCGACCTCGT GTTCGCCATC
TATTGCGCCG ACCGCGACCG CCGGTCGGCC CTGCCGATGG AGGCGCGCGA GCGCCCGCCC
GGCGGCTCGG CCTGGCTCGG CCGCGCCCGC GGGCTGCAGC GCGCCCTCAT CGAACGCTGG
GCCGCCCTTC CCGCCTGA
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| Protein sequence | MTFTRRWLLS ALLASAATPV LAEAPLTSPR PPRRGFLEPP PEAGDLVARA ALGGAVAYVV
ADARSGTVLE AANAALRLPP ASTAKTVTAL YGLETLGPDF RFTTRLLATG PVTNGILQGD
LILSGSGDPT LSTDALGEMA ARLRARGITG ITGRYLADAS ALPAVPLIDP EQPDHVGYNP
ALSGLNLNFN RVHFEWKQAA KGWSVTMDAR AERFVPPVSM ARMKVVTRDL PIYTYAGDQG
SDSWTVASGA LGAAGSRWLP VRHPEAYTAE VFQTLARAQG IELPAAQVVR VRPEGAALVE
WQSDPLREIL RDMLKFSTNI TAEAVGLAAS GAPSLAQSAA AMSAWANRRF GLSTAFHDHS
GLGGGSLVSA ADMVTALLAA EREGLGLRPL LKRTEIGGGK GTKKGARRIA VAAKTGTLNF
VSGLVGIATA QDGRDLVFAI YCADRDRRSA LPMEARERPP GGSAWLGRAR GLQRALIERW
AALPA
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