Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_2192 |
Symbol | nifH |
ID | 4897320 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009049 |
Strand | - |
Start bp | 2323297 |
End bp | 2324172 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640112786 |
Product | nitrogenase reductase |
Protein accession | YP_001044067 |
Protein GI | 126462953 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1348] Nitrogenase subunit NifH (ATPase) |
TIGRFAM ID | [TIGR01287] nitrogenase iron protein |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.866269 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.548044 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGAAAAC TCCGGCAGAT CGCTTTCTAC GGCAAGGGCG GGATCGGCAA GTCGACGACC TCGCAGAACA CCCTCGCGGC GCTGGTCGAG ATGGGCCAGA AAATCCTCAT CGTCGGCTGC GACCCCAAGG CCGACTCGAC CCGCCTGATC CTGAACACCA AGCTTCAGGA CACAGTGCTT CACCTCGCCG CCGAAGCGGG CTCCGTCGAG GATCTCGAAC TCGAGGATGT GGTCAAGATC GGCTACAAGG GCATCAAATG CACCGAAGCC GGCGGGCCGG AGCCGGGCGT GGGCTGCGCG GGCCGCGGCG TCATCACCGC CATCAACTTC CTGGAAGAGA ACGGCGCCTA TGACGACGTC GACTACGTCT CCTACGACGT GCTGGGCGAC GTGGTCTGCG GCGGCTTCGC CATGCCGATC CGCGAGAACA AGGCGCAGGA AATCTACATC GTCATGTCGG GCGAGATGAT GGCGCTCTAT GCGGCCAACA ACATCGCCAA GGGCATCCTG AAATACGCGA ACTCGGGCGG CGTGCGCCTC GGCGGCCTGA TCTGCAACGA GCGCAAGACC GACCGCGAGC TGGAACTGGC CGAGGCCCTC GCCGCGCGTC TGGGTTGCAA GATGATCCAC TTCGTCCCGC GCGACAATAT CGTGCAGCAC GCCGAGCTCC GCCGCGAGAC GGTCATCCAG TATGCACCCG AGAGCAAGCA GGCGCAGGAA TATCGCGAAC TGGCCCGCAA GATCCACGAG AACTCGGGCA AGGGCGTGAT CCCGACCCCG ATCACCATGG AAGAGCTGGA AGAGATGCTG ATGGATTTCG GCATCATGCA GTCCGAGGAA GACCGGCTCG CCGCCATCGC CGCCGCCGAG GCCTGA
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Protein sequence | MGKLRQIAFY GKGGIGKSTT SQNTLAALVE MGQKILIVGC DPKADSTRLI LNTKLQDTVL HLAAEAGSVE DLELEDVVKI GYKGIKCTEA GGPEPGVGCA GRGVITAINF LEENGAYDDV DYVSYDVLGD VVCGGFAMPI RENKAQEIYI VMSGEMMALY AANNIAKGIL KYANSGGVRL GGLICNERKT DRELELAEAL AARLGCKMIH FVPRDNIVQH AELRRETVIQ YAPESKQAQE YRELARKIHE NSGKGVIPTP ITMEELEEML MDFGIMQSEE DRLAAIAAAE A
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