| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_2181 |
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| Symbol | |
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| ID | 4896848 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009049 |
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| Strand | - |
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| Start bp | 2311243 |
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| End bp | 2312418 |
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| Gene Length | 1176 bp |
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| Protein Length | 391 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 640112775 |
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| Product | homocitrate synthase |
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| Protein accession | YP_001044056 |
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| Protein GI | 126462942 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR02660] homocitrate synthase NifV |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.703624 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.187711 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCGCC AGCAGCCCCG GGCGAGCTTC CTGCCCGAAA GCCCGCTCGC CCCCGTGGCC
CTCTGCGACA CGACGCTGCG CGACGGAGAG CAGACGGCGG GCGTGGCCTT CACCCGCGCC
GAGAAGCGGG CCATCGCCGA GGCGCTGCAG GCCGCAGGCG TGGCCGAAGT CGAGGTGGGC
GTGCCCGCCA TGGGCGAGGA GGAGCGGGCC GACATCCGGG CGGTGGCGGC GGTGCTGAAG
ACGGCGGCCC CCGTTGTCTG GTGCCGCCTG CGCGCCGAGG ATCTGGCGGC CGCGCAGCGC
ACGGGCGTCG TGCGGCTCCA TATCGGCGTC CCCGTCTCCG AGCGCCAGAT CAGTGCCAAG
CTCGGCAAGG ACGCGGCCTG GGTGCGCGAC AAGGTCGAGA AGCTCGTGCG CGCCGCCTCC
TGGGCCGGGC ACAAGGTGTC GGTCGGGGCC GAGGATGCCT CGCGCGCCGA TCCGTTCTTT
CTGGCCGAGA TCGCCCATGT CGCGGCCGAG GCGGGCGCGA TCCGCTTCCG CATCTCGGAC
ACGCTGGGCG TGCTCGACCC GTTCGCTGCG CACGAGCTGG TGGGCCGCGT CGTCACGCGC
TGCCCGCTGC CGGTGGAGTT CCACGGCCAC AACGATCTGG GCATGGCCAC GGCCAACAGC
CTCGCCGCCG CGCGCGCCGG GGCCTCGCAC CTGTCGGTCA CGGTGAACGG GCTGGGCGAG
CGGGCGGGCA ATGCCGCGCT CGAGGAGGTG GCGGCCGCGC TCGAAGCGGC GGGCCGCGCC
ACCGGCGTCG CGCTGGGCCA GCTCTGCGCC CTCTCGGAGC TGGTGGCCCG CGCCTCGGGC
CGTCCTCTCT CGCCGCAGAA GCCCATCGTG GGCGAGGGGG TCTTCACCCA TGAATGCGGC
ATCCATGTCG ACGGGCTGAT GAAGGACCGC GCCACCTACG AGAGCGCGGA CCTGCGCCCC
GAGCGGTTCG GCCGCAGCCA CCGCATCGCC ATCGGCAAGC ATTCCTCGGC CGCCGGGCTC
GCCCGGGCGC TGGCCGAGGC GGGGCTTCCC GCCGACGCGG CGACGCTCGC GGCCCTGATG
CCCGCGCTGC GCGACTGGGC GGCCACCGCC AAGCGCGCGG CCGCCCCCGA GGATCTTGCG
GCGCTCCTTG CCGCGCAAAC CGAAACCGCC CGTTGA
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| Protein sequence | MSRQQPRASF LPESPLAPVA LCDTTLRDGE QTAGVAFTRA EKRAIAEALQ AAGVAEVEVG
VPAMGEEERA DIRAVAAVLK TAAPVVWCRL RAEDLAAAQR TGVVRLHIGV PVSERQISAK
LGKDAAWVRD KVEKLVRAAS WAGHKVSVGA EDASRADPFF LAEIAHVAAE AGAIRFRISD
TLGVLDPFAA HELVGRVVTR CPLPVEFHGH NDLGMATANS LAAARAGASH LSVTVNGLGE
RAGNAALEEV AAALEAAGRA TGVALGQLCA LSELVARASG RPLSPQKPIV GEGVFTHECG
IHVDGLMKDR ATYESADLRP ERFGRSHRIA IGKHSSAAGL ARALAEAGLP ADAATLAALM
PALRDWAATA KRAAAPEDLA ALLAAQTETA R
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