| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_2179 |
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| Symbol | |
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| ID | 4895952 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009049 |
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| Strand | - |
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| Start bp | 2309501 |
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| End bp | 2310805 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640112773 |
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| Product | RNA polymerase, sigma 54 subunit, RpoN |
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| Protein accession | YP_001044054 |
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| Protein GI | 126462940 |
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| COG category | [K] Transcription |
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| COG ID | [COG1508] DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog |
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| TIGRFAM ID | [TIGR02395] RNA polymerase sigma-54 factor |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.570526 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0685307 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACATGA TGCAGTTCCA GCGTCAGACG ACCCAGCTGG CCATGACCCA GCGGATGCAG
GAGTCGCTGC GGATCCTGCA GATGAGCAAC GCCGATCTCG CCGACTATCT GACGGCGCAG
GCGCTGGAAA ATCCCTGCCT CGAGGTGCGC GTGCCCGAAG GGACGTCGGT CGCCCCCGCG
CTGCCCTCGC GCGGGATCCA GGCGGGGCTC GACCGCGATG CCTTCGCCAC CGTCGAGGGC
CAGCCGCCGA GCCTTCTGGC CCATGTCGAG GCGCAGATCG ATCTGGCCTT CTTCGATCCG
GGCGACCGGC GCACGGCCCT GGCCTTCGCC GAGGCGCTGG AGCCCTCGGG CTGGCTCGGC
CAGCCCGTCT CCGAGATCGC CGCCGCGGCC GAGGTGGAGG AGGAGGAGGC GCTGGTCATC
CTCGAGCGGT TGCAGGCCTT GGAGCCCGCG GGCCTCTTCG CCCGGTCGCT GGCCGAATGC
CTCGCGCTGC AGCTCGAGGA TCTGGGGCTG CTGACCTGGG AGCTGCGCAC GATGCTCGAC
CATCTGCCGC TTCTCGCCGA GGGGCGGATC GCCGATCTCG CCCGCCGCTG CGACTGCGAG
CCCGAGCATA TCCGCGAGAA TCTGGCGCTG ATCCGCAGCC TGAGCCCCAA GCCCGGCGAG
GCCTTCGCGG CCGACCGCAC GCCGATCCAG CCGCCCGACG TGCGCGTGCT GCGCGGCCCG
GAGGGCTGGG AGGTCGAGCT CACCCGGGCG CAGCTGCCCC GCATCCGGGT CAGCGAGGCA
GGAGACACCG GCGACCGGCA GGCCGACGCC TGGCTCGCCC GCGCCCGCTC GCAGGCGCGC
TGGCTGGAGC GGGCGGTCGA GCGGCGGCAG GCCACGCTCC TGCGCACCGC CGTCTGCCTC
GTGCGCCATC AGGCCGACTT TCTCGATCAG GGGCCGCGCG CGCTCCGGCC GCTGTCGATG
GAGGAGGTGG CGCTGGAACT CGACCTCCAT CCCTCGACCA TCAGTCGCGC CACCGCCACC
CGGCTGATCG AGACGCCGCG CGGGCTGATC CCGCTGCGCG CCTTCTTCAG CCGGTCGGTC
TCCTCGGACG GGCCCGAGGC GCCGCAGTCG CAGGATGCGC TGATGGCGCT CGTGCGCGAC
ATCATCGCGC GCGAGGATCG CACGAAACCC TTCTCGGACG ATGCGATCGT GAAGCAGGCG
AAGCTCGCGG GCGCGGTTCT GGCCCGGCGC ACCGTCACCA AATATCGCGA GACGCTGGGG
ATCCCCTCGT CCTACGACCG CAAGCGCGCC GCCGCCGCGG CCTGA
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| Protein sequence | MDMMQFQRQT TQLAMTQRMQ ESLRILQMSN ADLADYLTAQ ALENPCLEVR VPEGTSVAPA
LPSRGIQAGL DRDAFATVEG QPPSLLAHVE AQIDLAFFDP GDRRTALAFA EALEPSGWLG
QPVSEIAAAA EVEEEEALVI LERLQALEPA GLFARSLAEC LALQLEDLGL LTWELRTMLD
HLPLLAEGRI ADLARRCDCE PEHIRENLAL IRSLSPKPGE AFAADRTPIQ PPDVRVLRGP
EGWEVELTRA QLPRIRVSEA GDTGDRQADA WLARARSQAR WLERAVERRQ ATLLRTAVCL
VRHQADFLDQ GPRALRPLSM EEVALELDLH PSTISRATAT RLIETPRGLI PLRAFFSRSV
SSDGPEAPQS QDALMALVRD IIAREDRTKP FSDDAIVKQA KLAGAVLARR TVTKYRETLG
IPSSYDRKRA AAAA
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