| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_2177 |
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| Symbol | |
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| ID | 4895362 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009049 |
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| Strand | + |
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| Start bp | 2308368 |
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| End bp | 2309027 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640112771 |
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| Product | Hly-III family protein |
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| Protein accession | YP_001044052 |
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| Protein GI | 126462938 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1272] Predicted membrane protein, hemolysin III homolog |
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| TIGRFAM ID | [TIGR01065] channel protein, hemolysin III family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00438954 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0630884 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGACGC AGCGCACCCC CCGATCCGGC TACAGCCGCG CCGAGCGCCT CTCGGACGCG
GCGGTTCATG TCTCGGGCAT CGCCGCGGCG CTCTGCGGCG TGCCCGTCCT CATCGCGCTG
ACCGTGCTCT GGCGCGGCGA CGGGATGGCC GTGGCGGGCG CCTCGATCTA CGGGGCCACG
CTCCTGCTCA TGATCCTCTG CTCGGCCGTC TACCACATGG TCCCGCACCC GGACTGGACG
GCGCTCCTGC GGCGCCTCGA TCATTCCGCC ATCTACTGCA AGATCGCGGG CACCTACTCG
GCCTTCACCC TGATCTCGGG ACAGGGGCTC ACGCTGCTGG CCGGGATCTG GGCCGCGGCC
CTCTGCGGCA CGGCGCTGAA GCTCCACTCG CCCGAGAAAT ACCGCTGGGG CGCTCTGGCG
CTCTATCTCG GGATGGGCTG GGCGGGGGTC GCCCTTGGCT GGCCGCTCTT CGCCTCGCTG
ACCGGCCCCG TTCTGGCGCT GATCGCGGCG GGCGGGCTGC TCTACACGGT GGGTGTCGTC
TTCTACCTGT GCGAACGCTT GCCCTTCCAC ACCACGATCT GGCATCTCTT CGTCCTGACG
GCGAGCGTGA TCTTCTACGC CGCGGTGATG ATCCATGTGG CCGGCACGGC GGCCGACTGA
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| Protein sequence | MLTQRTPRSG YSRAERLSDA AVHVSGIAAA LCGVPVLIAL TVLWRGDGMA VAGASIYGAT
LLLMILCSAV YHMVPHPDWT ALLRRLDHSA IYCKIAGTYS AFTLISGQGL TLLAGIWAAA
LCGTALKLHS PEKYRWGALA LYLGMGWAGV ALGWPLFASL TGPVLALIAA GGLLYTVGVV
FYLCERLPFH TTIWHLFVLT ASVIFYAAVM IHVAGTAAD
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