Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_2157 |
Symbol | |
ID | 4898093 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009049 |
Strand | + |
Start bp | 2285097 |
End bp | 2285966 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640112751 |
Product | hydrogenase accessory protein HypB |
Protein accession | YP_001044032 |
Protein GI | 126462918 |
COG category | [K] Transcription [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0378] Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase |
TIGRFAM ID | [TIGR00073] hydrogenase accessory protein HypB |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.126874 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.122693 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGCACGG TGTGCGGCTG CGGCGGCAAT GTGACCTTCG AGGCGGGGCA TCGCCATGCC CATGGCGCGG ACGCGCATTC TCATCATGCG AGCTTTTCCC ATGGCCACGC CGGGCATCAT TCGCACGGGA GTCCGGGCAC GGGCCACGCG CATCACCATG GCCTCGGGCC TGCCGGGGTG AGCGTGCCGG GGATGAGCCA GGAGCGGCTG ATCGAGGTCG AGACCGACAT CCTCGCCAAG AACAACATCT ATGCCATGGC GAACCGGCAC CGCCTGCGCG AGCTGGGTGT CCATGCCGTC AACCTCGTCT CCTCGCCCGG CTCGGGGAAG ACGACGCTAC TGTGCAAAAC CATTTCACTT CTTGCGGGCG CGCCGCTCGC CGTGATCGAG GGCGACCAGC AGACCTCGAA CGATGCCGAC CGGATCCGGG CCACGGGCGC CCCGGCGGTG CAGATCAATA CGGGCAAGGG CTGCCATCTC GATGCCCATA TGGTCGGGCA TGCGATGGAG GACCTTCCGC TCGGGGCGGG CGCCCATCTC TTCATCGAGA ATGTGGGCAA CCTCGTCTGT CCCGCCGCCT TCGATCTGGG CGAGGATGCC AAGGTGGCGA TCCTCTCGGT GACAGAGGGC GAGGACAAGC CGCTGAAATA CCCAGACATT TTCACCGCTG CACGGCTTGC GATCCTCAAC AAGGTCGATC TTGCACCCCA TTGCGACGTC GATCTCGACC TCTACGAGGC AAACCTGCGC CGGGTGAACC CGCTGATCGA GGTGCTGCGC GTCTCGGCCC GCACCGGCGA GGGGATGGAG GGCTGGGTGA AATGGCTTTC CGCCCGCCGC ACGGCCAAGA TGCTCGGGGC GCGCGGCTGA
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Protein sequence | MCTVCGCGGN VTFEAGHRHA HGADAHSHHA SFSHGHAGHH SHGSPGTGHA HHHGLGPAGV SVPGMSQERL IEVETDILAK NNIYAMANRH RLRELGVHAV NLVSSPGSGK TTLLCKTISL LAGAPLAVIE GDQQTSNDAD RIRATGAPAV QINTGKGCHL DAHMVGHAME DLPLGAGAHL FIENVGNLVC PAAFDLGEDA KVAILSVTEG EDKPLKYPDI FTAARLAILN KVDLAPHCDV DLDLYEANLR RVNPLIEVLR VSARTGEGME GWVKWLSARR TAKMLGARG
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