| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_2156 |
|---|
| Symbol | |
|---|
| ID | 4897783 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17029 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009049 |
|---|
| Strand | + |
|---|
| Start bp | 2284756 |
|---|
| End bp | 2285097 |
|---|
| Gene Length | 342 bp |
|---|
| Protein Length | 113 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640112750 |
|---|
| Product | hydrogenase nickel insertion protein HypA |
|---|
| Protein accession | YP_001044031 |
|---|
| Protein GI | 126462917 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0375] Zn finger protein HypA/HybF (possibly regulating hydrogenase expression) |
|---|
| TIGRFAM ID | [TIGR00100] hydrogenase nickel insertion protein HypA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.462739 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.111432 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCATGAGA TGTCGCTCTG CGAGGGGATC CGGGGCATCG TCGAGGATCA GGCGCGGCGC
CACGGCTTTG CGACGGTAAA GGTGCTGCGG CTGGAGATCG GCCGCTTTGC CGGCGTCGAA
AAGGCGGCCC TCGGCTTCGC CTTCGACGTA GTGATGCGGG GCAGCGCCGC CGAGGGGGCA
CGGCTCGAGA TCCTCGACCT GCCGGGCCGG GCGCTCTGCT ATGACTGCGG CGAGGAAGCC
GCTATCGAGG ACAGGTTCGA CCCCTGCCCG CTCTGCGGCG GCGGCCGTCT GATGCCGGTG
GGGGGCGACG AGATGCGGAT CAAGGACATG GAGGTTCAGT GA
|
|---|
| Protein sequence | MHEMSLCEGI RGIVEDQARR HGFATVKVLR LEIGRFAGVE KAALGFAFDV VMRGSAAEGA
RLEILDLPGR ALCYDCGEEA AIEDRFDPCP LCGGGRLMPV GGDEMRIKDM EVQ
|
|---|
| |